Evidence map›Paper›PMID 32899462›Full record

ArticleBiomolecules2020

Different Research Approaches in Unraveling the Venom Proteome of

Konrad Kamil Hus, Łukasz Marczak, Vladimír Petrilla, Monika Petrillová, Jaroslav Legáth, Aleksandra Bocian

Open access · goldAbstract readComparative Study
In one paragraph

Article in Biomolecules, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.4field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 13 citations in OpenAlex.

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  9. Effects of 3FTx Protein Fraction fromMolecules (Basel, Switzerland) · 2021
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  10. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Konrad Kamil HusDepartment of Biotechnology and Bioinformatics, Faculty of Chemistry, Rzeszow University of Technology, Powstańców Warszawy 6, 35-959 Rzeszów, Poland.ORCID 0000-0003-2723-3691
Łukasz MarczakInstitute of Bioorganic Chemistry, Polish Academy of Sciences, Noskowskiego 12/14, 61-704 Poznań, Poland.
Vladimír PetrillaDepartment of Physiology, University of Veterinary Medicine and Pharmacy, Komenského 73, 041 81 Košice, Slovakia.
Monika PetrillováDepartment of General Education Subjects, University of Veterinary Medicine and Pharmacy, Komenského 73, 041 81 Kosice, Slovakia.
Jaroslav LegáthDepartment of Biotechnology and Bioinformatics, Faculty of Chemistry, Rzeszow University of Technology, Powstańców Warszawy 6, 35-959 Rzeszów, Poland.
Aleksandra BocianDepartment of Biotechnology and Bioinformatics, Faculty of Chemistry, Rzeszow University of Technology, Powstańców Warszawy 6, 35-959 Rzeszów, Poland.ORCID 0000-0003-1907-9399
Rzeszów University of Technology · PLUniversity of Veterinary Medicine in Košice · SKInstitute of Bioorganic Chemistry, Polish Academy of Sciences · PL

Funding

Slovak Research and Development Agency, Ministry of Education, Science, Research and Sport of the Slovak Republic APVV-17-0017
6 · The paper itself

Abstract

The dynamic development of venomics in recent years has resulted in a significant increase in publicly available proteomic data. The information contained therein is often used for comparisons between different datasets and to draw biological conclusions therefrom. In this article, we aimed to show the possible differences that can arise, in the final results of the proteomic experiment, while using different research workflows. We applied two software solutions (PeptideShaker and MaxQuant) to process data from shotgun LC-MS/MS analysis of

Indexed as

AnimalsChromatography, High Pressure LiquidComputational BiologyElectrophoresis, Polyacrylamide GelFemaleMaleNajaProteomeProteomicsReptilian ProteinsSnake VenomsSoftwareTandem Mass SpectrometryProteomeReptilian ProteinsSnake Venomsabsolute protein quantificationlabel-free shotgun mass spectrometrysnake venomvenomics

Identifiers

PMID32899462
PMCPMC7566006
OpenAlexW3083281735

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.