Evidence map›Paper›PMID 32899384›Full record

ArticleInternational journal of molecular sciences2020

Molecular Profile of Barrett's Esophagus and Gastroesophageal Reflux Disease in the Development of Translational Physiological and Pharmacological Studies.

Edyta Korbut, Vincent T Janmaat, Mateusz Wierdak, Jerzy Hankus, Dagmara Wójcik, Marcin Surmiak, Katarzyna Magierowska, Tomasz Brzozowski, Maikel P Peppelenbosch, Marcin Magierowski

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.8field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 18 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 2 countries.

Edyta KorbutDepartment of Physiology, Jagiellonian University Medical College, 31-531 Cracow, Poland.
Vincent T JanmaatDepartment of Gastroenterology and Hepatology, Erasmus MC-University Medical Center Rotterdam, 3015 CN Rotterdam, The Netherlands.
Mateusz WierdakDepartment of Physiology, Jagiellonian University Medical College, 31-531 Cracow, Poland.ORCID 0000-0003-1350-1886
Jerzy HankusDepartment of Pathomorphology, Jagiellonian University Medical College, 31-531 Cracow, Poland.
Dagmara WójcikDepartment of Physiology, Jagiellonian University Medical College, 31-531 Cracow, Poland.ORCID 0000-0003-3098-9617
Marcin SurmiakDepartment of Physiology, Jagiellonian University Medical College, 31-531 Cracow, Poland.ORCID 0000-0001-8396-1488
Katarzyna MagierowskaDepartment of Physiology, Jagiellonian University Medical College, 31-531 Cracow, Poland.ORCID 0000-0002-4866-1102
Tomasz BrzozowskiDepartment of Physiology, Jagiellonian University Medical College, 31-531 Cracow, Poland.ORCID 0000-0002-5805-0065
Maikel P PeppelenboschDepartment of Gastroenterology and Hepatology, Erasmus MC-University Medical Center Rotterdam, 3015 CN Rotterdam, The Netherlands.ORCID 0000-0001-9112-6028
Marcin MagierowskiDepartment of Physiology, Jagiellonian University Medical College, 31-531 Cracow, Poland.ORCID 0000-0003-0175-5600
Jagiellonian University · PLErasmus MC · NL

Funding

Narodowe Centrum Nauki UMO-2016/23/D/NZ4/01913The National Centre for Research and Development (Poland) LIDER/9/0055/L-8/16/NCBR/2017
6 · The paper itself

Abstract

Barrett's esophagus (BE) is a premalignant condition caused by gastroesophageal reflux disease (GERD), where physiological squamous epithelium is replaced by columnar epithelium. Several in vivo and in vitro BE models were developed with questionable translational relevance when implemented separately. Therefore, we aimed to screen Gene Expression Omnibus 2R (GEO2R) databases to establish whether clinical BE molecular profile was comparable with animal and optimized human esophageal squamous cell lines-based in vitro models. The GEO2R tool and selected databases were used to establish human BE molecular profile. BE-specific mRNAs in human esophageal cell lines (Het-1A and EPC2) were determined after one, three and/or six-day treatment with acidified medium (pH 5.0) and/or 50 and 100 µM bile mixture (BM). Wistar rats underwent microsurgical procedures to generate esophagogastroduodenal anastomosis (EGDA) leading to BE. BE-specific genes (keratin (

Indexed as

Gene Expression ProfilingGene Expression RegulationMolecular Targeted TherapyAnimalsBarrett EsophagusGastroesophageal RefluxGastrointestinal AgentsHumansMaleRatsRats, WistarGastrointestinal AgentsBarrett’s esophagusesophageal epitheliummolecular gastrointestinal pathophysiologymolecular gastrointestinal pharmacologymolecular profile

Identifiers

PMID32899384
PMCPMC7504401
OpenAlexW3082924164

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.