Evidence map›Paper›PMID 32897511›Full record

ArticleBrazilian journal of microbiology : [publication of the Brazilian Society for Microbiology]2020

Molecular and genome characterization of colistin-resistant Escherichia coli isolates from wild sea lions (Zalophus californianus).

Rigoberto Hernández-Castro, Jonathan Rodríguez-Santiago, Juan Téllez-Sosa, Sugey Bravo-Romero, Jesús Silva-Sánchez, Alejandro Sánchez-Pérez, Rosalia Avalos-Téllez, Luary Carolina Martínez-Chavarría, Juan Xicohtencatl-Cortes, Ulises Garza-Ramos

Open access · greenAbstract read
In one paragraph

Article in Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology], 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.3field-weighted citation impact, top 54% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 1 country.

Rigoberto Hernández-CastroDepartamento Ecología de Agentes Patógenos, Hospital General "Dr. Manuel Gea González", Ciudad de México, Mexico.
Jonathan Rodríguez-SantiagoLaboratorio de Resistencia Bacteriana; Centro de Investigación Sobre Enfermedades Infecciosas (CISEI), Instituto Nacional de Salud Pública (INSP), Cuernavaca, Morelos, Mexico.
Juan Téllez-SosaCentro de Investigación Sobre Enfermedades Infecciosas (CISEI), Instituto Nacional de Salud Pública (INSP), Cuernavaca, Morelos, Mexico.
Sugey Bravo-RomeroCentro de Investigación Sobre Enfermedades Infecciosas (CISEI), Instituto Nacional de Salud Pública (INSP), Cuernavaca, Morelos, Mexico.
Jesús Silva-SánchezLaboratorio de Resistencia Bacteriana; Centro de Investigación Sobre Enfermedades Infecciosas (CISEI), Instituto Nacional de Salud Pública (INSP), Cuernavaca, Morelos, Mexico.
Alejandro Sánchez-PérezLaboratorio de Resistencia Bacteriana; Centro de Investigación Sobre Enfermedades Infecciosas (CISEI), Instituto Nacional de Salud Pública (INSP), Cuernavaca, Morelos, Mexico.
Rosalia Avalos-TéllezÁrea de Protección de Flora y Fauna. Islas del Golfo de California, Baja California, CONANP, SEMARNAT. Bahía de Los Ángeles, 22980, Ensenada, Baja California, Mexico.
Luary Carolina Martínez-ChavarríaDepartamento de Patología, Facultad de Medicina Veterinaria y Zootecnia, Universidad Nacional Autónoma de México, Coyoacán, 04510, Ciudad de México, Mexico.
Juan Xicohtencatl-CortesLaboratorio de Bacteriología Intestinal, Hospital Infantil de México Dr. Federico Gómez, Cuauhtémoc, 06720, Ciudad de México, Mexico.
Ulises Garza-RamosLaboratorio de Resistencia Bacteriana; Centro de Investigación Sobre Enfermedades Infecciosas (CISEI), Instituto Nacional de Salud Pública (INSP), Cuernavaca, Morelos, Mexico. ulises.garza@insp.mx.ORCID http://orcid.org/0000-0002-5013-3050
Instituto Nacional de Salud Pública · MXHospital General Dr. Manuel Gea Gonzalez · MXHospital Infantil de México Federico Gómez · MXUniversidad Autónoma de Baja California · MXUniversidad Nacional Autónoma de México · MX

Funding

SEP-CONACyT 256988
6 · The paper itself

Abstract

Using molecular and whole-genome sequencing tools, we investigated colistin-resistant Escherichia coli isolates from wild sea lions. Two unrelated E. coli colistin-resistant isolates, ST8259 and ST4218, were identified, both belonging to the B2 phylogroup and different serotypes. Polymorphisms in PmrA, PmrB, and PhoQ proteins were identified, and the role of PmrB and PhoQ in contributing to colistin resistance was determined by complementation assays. However, the mutations characterized in the present study are not involved in colistin resistance, which have been described in E. coli isolates from clinical settings. Therefore, the acquired mutations in pmrB and phoQ genes in resistance to colistin in bacteria related to marine environment animals are different. This work contributes to the surveillance and characterization of colistin resistance in Escherichia coli obtained from animals from aquatic environments.

Indexed as

Genome, BacterialAnimalsAnimals, WildAnti-Bacterial AgentsColistinDrug Resistance, Multiple, BacterialEscherichia coliEscherichia coli ProteinsMicrobial Sensitivity TestsSea LionsSerogroupWhole Genome SequencingAnti-Bacterial AgentsColistinEscherichia coli ProteinsAntimicrobial resistanceAquatic environmentsChromosomal mutationsTwo-component system

Identifiers

PMID32897511
PMCPMC7688835
OpenAlexW3083975687

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.