Evidence map›Paper›PMID 32896566›Full record

ArticleAntiviral research2020

Evaluation of SARS-CoV-2 3C-like protease inhibitors using self-assembled monolayer desorption ionization mass spectrometry.

Zachary A Gurard-Levin, Cheng Liu, Andreas Jekle, Ruchika Jaisinghani, Suping Ren, Koen Vandyck, Dirk Jochmans, Pieter Leyssen, Johan Neyts, Lawrence M Blatt and 5 more

Open access · hybridAbstract read
In one paragraph

Article in Antiviral research, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
0.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 39 citations in OpenAlex.

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  16. Pro108Ser mutation of SARS-CoV-2 3CLScientific reports · 2022
    Article
  17. Review
  18. Perspectives on SARS-CoV-2 Main Protease Inhibitors.Journal of medicinal chemistry · 2021
    Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 2 institutions in 2 countries.

Zachary A Gurard-LevinSAMDI Tech, Inc, Chicago, USA.
Cheng LiuAligos Therapeutics, Inc, South San Francisco, USA.
Andreas JekleAligos Therapeutics, Inc, South San Francisco, USA.
Ruchika JaisinghaniAligos Therapeutics, Inc, South San Francisco, USA.
Suping RenAligos Therapeutics, Inc, South San Francisco, USA.
Koen VandyckAligos Belgium BV, Leuven, Belgium.
Dirk JochmansRega Institute, KU Leuven, Leuven, Belgium.
Pieter LeyssenRega Institute, KU Leuven, Leuven, Belgium.
Johan NeytsRega Institute, KU Leuven, Leuven, Belgium.
Lawrence M BlattAligos Therapeutics, Inc, South San Francisco, USA.
Leonid BeigelmanAligos Therapeutics, Inc, South San Francisco, USA.
Julian A SymonsAligos Therapeutics, Inc, South San Francisco, USA.
Pierre RaboissonAligos Belgium BV, Leuven, Belgium.
Michael D ScholleSAMDI Tech, Inc, Chicago, USA.
Jerome DevalAligos Therapeutics, Inc, South San Francisco, USA. Electronic address: jdeval@aligos.com.
Rega Institute for Medical Research · BEArgos Therapeutics (United States) · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is the cause of the COVID-19 pandemic that began in 2019. The coronavirus 3-chymotrypsin-like cysteine protease (3CLpro) controls replication and is therefore considered a major target for antiviral discovery. This study describes the evaluation of SARS-CoV-2 3CLpro inhibitors in a novel self-assembled monolayer desorption ionization mass spectrometry (SAMDI-MS) enzymatic assay. Compared with a traditional FRET readout, the label-free SAMDI-MS assay offers greater sensitivity and eliminates false positive inhibition from compound interference with the optical signal. The SAMDI-MS assay was optimized and validated with known inhibitors of coronavirus 3CLpro such as GC376 (IC

Indexed as

Antiviral AgentsBetacoronavirusCoronavirus 3C ProteasesCoronavirus InfectionsCOVID-19COVID-19 Drug TreatmentCysteine EndopeptidasesCysteine Proteinase InhibitorsGlycoproteinsHeLa CellsHumansPandemicsPneumonia, ViralSARS-CoV-2Spectrometry, Mass, Matrix-Assisted Laser Desorption-IonizationViral Nonstructural ProteinsAntiviral AgentsCoronavirus 3C ProteasesCysteine EndopeptidasesCysteine Proteinase InhibitorsGlycoproteinsViral Nonstructural Proteins3CLproCoronavirusCOVID-19Mass spectrometryProtease inhibitorSAMDI-MS

Identifiers

PMID32896566
PMCPMC7834858
OpenAlexW3081741892

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.