Evidence map›Paper›PMID 32895738›Full record

ArticleJournal of applied genetics2020

Investigation of obsolete diversity of rye (Secale cereale L.) using multiplexed SSR fingerprinting and evaluation of agronomic traits.

Malgorzata Targonska-Karasek, Maja Boczkowska, Wieslaw Podyma, Małgorzata Pasnik, Maciej Niedzielski, Anna Rucinska, Zuzanna Nowak-Zyczynska, Monika Rakoczy-Trojanowska

Open access · hybridAbstract read
In one paragraph

Article in Journal of applied genetics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.2field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. A ddRADseq Survey of the Genetic Diversity of Rye (Plants (Basel, Switzerland) · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Malgorzata Targonska-KarasekPolish Academy of Sciences Botanical Garden - Center for Biological Diversity Conservation in Powsin, Warszawa, Poland.
Maja BoczkowskaPlant Breeding and Acclimatization Institute (IHAR) - National Research Institute, Radzików, Poland. m.boczkowska@ihar.edu.pl.ORCID https://orcid.org/0000-0001-8691-410X
Wieslaw PodymaPlant Breeding and Acclimatization Institute (IHAR) - National Research Institute, Radzików, Poland.ORCID https://orcid.org/0000-0003-2018-281X
Małgorzata PasnikPolish Academy of Sciences Botanical Garden - Center for Biological Diversity Conservation in Powsin, Warszawa, Poland.
Maciej NiedzielskiPolish Academy of Sciences Botanical Garden - Center for Biological Diversity Conservation in Powsin, Warszawa, Poland.
Anna RucinskaPolish Academy of Sciences Botanical Garden - Center for Biological Diversity Conservation in Powsin, Warszawa, Poland.
Zuzanna Nowak-ZyczynskaDepartment of Animal Genetics and Conservation, Warsaw University of Life Sciences, Warsaw, Poland.ORCID https://orcid.org/0000-0002-5907-9943
Monika Rakoczy-TrojanowskaDepartment of Plant Genetics, Breeding, and Biotechnology, Warsaw University of Life Sciences, Warsaw, Poland.ORCID https://orcid.org/0000-0001-6891-0471
Polish Academy of Sciences Botanical Garden – Center for Biological Diversity Conservation in Powsin · PLWarsaw University of Life Sciences · PL

Funding

Interdyscyplinarne Centrum Modelowania Matematycznego i Komputerowego UW G72-19
6 · The paper itself

Abstract

Common rye (Secale cereale L.) is one of the most important cereals in Europe. Nevertheless, its germplasm collections are among the least numerous compared with cereals. There are only about 27,000 Secale accessions in 70 gene banks around the world. Despite extensive research on the molecular characterization of genetic resources, only a fraction of this collection has been described. The main objective of the presented study was to perform genotypic and phenotypic characterization of an obsolete gene pool represented by 100 accessions originated from 28 countries around the world and preserved in the gene bank of the Polish Academy of Sciences Botanical Garden - Center for Biological Diversity Conservation in Powsin. Genetic analysis using simple sequence repeat markers showed that the obsolete gene pool is relatively large. This indicates that different sources of variability were used in breeding programs. However, the genetic variation is in no way related to the place of origin. Despite the great differences in the genetic make-up, the collection showed a broadly common phenotype. This could result in a low level of interest among breeders in the stored germplasm, undervalued as a source of important but not easily observable traits, e.g., high disease resistance, which was found in some accessions.

Indexed as

Genetic VariationBreedingDNA FingerprintingEuropeGenotypeMicrosatellite RepeatsPhenotypeSecaleDiversityGermplasmPopulation structureRyeSSR

Identifiers

PMID32895738
PMCPMC7652744
OpenAlexW3083940752

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.