Evidence map›Paper›PMID 32894195›Full record

ArticleClinical epigenetics2020

IFN-α confers epigenetic regulation of HBV cccDNA minichromosome by modulating GCN5-mediated succinylation of histone H3K79 to clear HBV cccDNA.

Ying Yuan, Hongfeng Yuan, Guang Yang, Haolin Yun, Man Zhao, Zixian Liu, Lina Zhao, Yu Geng, Lei Liu, Jiapei Wang and 3 more

Open access · goldAbstract read
In one paragraph

Article in Clinical epigenetics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
5.8field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 69 citations in OpenAlex.

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  17. Dysregulation of protein succinylation and disease development.Frontiers in molecular biosciences · 2024
    Review
  18. Review
  19. Review
  20. The role of HBV cccDNA in occult hepatitis B virus infection.Molecular and cellular biochemistry · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 1 institution in 1 country.

Ying YuanNankai University, 94 Weijin Road, Tianjin, 300071, People's Republic of China.
Hongfeng YuanNankai University, 94 Weijin Road, Tianjin, 300071, People's Republic of China.
Guang YangNankai University, 94 Weijin Road, Tianjin, 300071, People's Republic of China.
Haolin YunNankai University, 94 Weijin Road, Tianjin, 300071, People's Republic of China.
Man ZhaoNankai University, 94 Weijin Road, Tianjin, 300071, People's Republic of China.
Zixian LiuNankai University, 94 Weijin Road, Tianjin, 300071, People's Republic of China.
Lina ZhaoNankai University, 94 Weijin Road, Tianjin, 300071, People's Republic of China.
Yu GengNankai University, 94 Weijin Road, Tianjin, 300071, People's Republic of China.
Lei LiuNankai University, 94 Weijin Road, Tianjin, 300071, People's Republic of China.
Jiapei WangNankai University, 94 Weijin Road, Tianjin, 300071, People's Republic of China.
Huihui ZhangNankai University, 94 Weijin Road, Tianjin, 300071, People's Republic of China.
Yufei WangNankai University, 94 Weijin Road, Tianjin, 300071, People's Republic of China.
Xiao-Dong ZhangNankai University, 94 Weijin Road, Tianjin, 300071, People's Republic of China. zhangxd@nankai.edu.cn.ORCID 0000-0002-6891-9019
Nankai University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundHepatitis B virus covalently closed circular DNA (HBV cccDNA) is assembled by histones and non-histones into a chromatin-like cccDNA minichromosome in the nucleus. The cellular histone acetyltransferase GCN5, displaying succinyltransferase activity, is recruited onto cccDNA to modulate HBV transcription in cells. Clinically, IFN-α is able to repress cccDNA. However, the underlying mechanism of IFN-α in the depression of cccDNA mediated by GCN5 is poorly understood. Here, we explored the effect of IFN-α on GCN5-mediated succinylation in the epigenetic regulation of HBV cccDNA minichromosome.

resultsSuccinylation modification of the cccDNA minichromosome has been observed in HBV-infected human liver-chimeric mice and HBV-expressing cell lines. Moreover, histone H3K79 succinylation by GCN5 was identified in the system. Interestingly, the mutant of histone H3K79 efficiently blocked the replication of HBV, and interference with GCN5 resulted in decreased levels of HBV DNA, HBsAg, and HBeAg in the supernatant from de novo HBV-infected HepaRG cells. Consistently, the levels of histone H3K79 succinylation were significantly elevated in the livers of HBV-infected human liver-chimeric mice. The knockdown or overexpression of GCN5 or the mutant of GCN5 could affect the binding of GCN5 to cccDNA or H3K79 succinylation, leading to a change in cccDNA transcription activity. In addition, Southern blot analysis validated that siGCN5 decreased the levels of cccDNA in the cells, suggesting that GCN5-mediated succinylation of histone H3K79 contributes to the epigenetic regulation of cccDNA minichromosome. Strikingly, IFN-α effectively depressed histone H3K79 succinylation in HBV cccDNA minichromosome in de novo HepG2-NTCP and HBV-infected HepaRG cells.

conclusionsIFN-α epigenetically regulates the HBV cccDNA minichromosome by modulating GCN5-mediated succinylation of histone H3K79 to clear HBV cccDNA. Our findings provide new insights into the mechanism by which IFN-α modulate the epigenetic regulation of HBV cccDNA minichromosome.

Indexed as

AnimalsBlotting, SouthernCell LineEpigenesis, GeneticFemaleHepatitis B e AntigensHepatitis B Surface AntigensHepatitis B virusHistone AcetyltransferasesHistonesHumansInterferon-alphaMaleMiceModels, Animalp300-CBP-Associated FactorHepatitis B e AntigensHepatitis B Surface AntigensHistone AcetyltransferasesHistonesInterferon-alphaKAT2A protein, humanp300-CBP-Associated FactorEpigenetic regulationGCN5HBVHBV cccDNA minichromosomeHistone succinylationInterferon-α

Identifiers

PMID32894195
PMCPMC7487718
OpenAlexW3083429420

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.