Evidence map›Paper›PMID 32892688›Full record

ArticleJournal of the American Heart Association2020

Unique Transcriptome Signature Distinguishes Patients With Heart Failure With Myopathy.

Talia Caspi, Sam Straw, Chew Cheng, Jack O Garnham, Jason L Scragg, Jessica Smith, Aaron O Koshy, Eylem Levelt, Piruthivi Sukumar, John Gierula and 7 more

Open access · goldAbstract read
In one paragraph

Article in Journal of the American Heart Association, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 16 citations in OpenAlex.

  1. Trial
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  7. Biallelic Variants inInternational journal of molecular sciences · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 1 institution in 1 country.

Talia CaspiLeeds Institute of Cardiovascular and Metabolic Medicine University of Leeds United Kingdom.
Sam StrawLeeds Institute of Cardiovascular and Metabolic Medicine University of Leeds United Kingdom.
Chew ChengLeeds Institute of Cardiovascular and Metabolic Medicine University of Leeds United Kingdom.
Jack O GarnhamLeeds Institute of Cardiovascular and Metabolic Medicine University of Leeds United Kingdom.
Jason L ScraggLeeds Institute of Cardiovascular and Metabolic Medicine University of Leeds United Kingdom.
Jessica SmithLeeds Institute of Cardiovascular and Metabolic Medicine University of Leeds United Kingdom.
Aaron O KoshyLeeds Institute of Cardiovascular and Metabolic Medicine University of Leeds United Kingdom.
Eylem LeveltLeeds Institute of Cardiovascular and Metabolic Medicine University of Leeds United Kingdom.
Piruthivi SukumarLeeds Institute of Cardiovascular and Metabolic Medicine University of Leeds United Kingdom.
John GierulaLeeds Institute of Cardiovascular and Metabolic Medicine University of Leeds United Kingdom.
David J BeechLeeds Institute of Cardiovascular and Metabolic Medicine University of Leeds United Kingdom.
Mark T KearneyLeeds Institute of Cardiovascular and Metabolic Medicine University of Leeds United Kingdom.
Richard M CubbonLeeds Institute of Cardiovascular and Metabolic Medicine University of Leeds United Kingdom.
Stephen B WheatcroftLeeds Institute of Cardiovascular and Metabolic Medicine University of Leeds United Kingdom.
Klaus K WitteLeeds Institute of Cardiovascular and Metabolic Medicine University of Leeds United Kingdom.
Lee D RobertsLeeds Institute of Cardiovascular and Metabolic Medicine University of Leeds United Kingdom.
T Scott BowenSchool of Biomedical Sciences Faculty of Biological Sciences University of Leeds United Kingdom.
University of Leeds · GB

Funding

British Heart Foundation FS/12/80/29821Department of HealthMedical Research Council MR/S025472/1
6 · The paper itself

Abstract

Background People with chronic heart failure (CHF) experience severe skeletal muscle dysfunction, characterized by mitochondrial abnormalities, which exacerbates the primary symptom of exercise intolerance. However, the molecular triggers and characteristics underlying mitochondrial abnormalities caused by CHF remain poorly understood. Methods and Results We recruited 28 patients with CHF caused by reduced ejection fraction and 9 controls. We simultaneously biopsied skeletal muscle from the pectoralis major in the upper limb and from the vastus lateralis in the lower limb. We phenotyped mitochondrial function in permeabilized myofibers from both sites and followed this by complete RNA sequencing to identify novel molecular abnormalities in CHF skeletal muscle. Patients with CHF presented with upper and lower limb skeletal muscle impairments to mitochondrial function that were of a similar deficit and indicative of a myopathy. Mitochondrial abnormalities were strongly correlated to symptoms. Further RNA sequencing revealed a unique transcriptome signature in CHF skeletal muscle characterized by a novel triad of differentially expressed genes related to deficits in energy metabolism including adenosine monophosphate deaminase 3, pyridine nucleotide-disulphide oxidoreductase domain 2, and lactate dehydrogenase C. Conclusions Our data suggest an upper and lower limb metabolic myopathy that is characterized by a unique transcriptome signature in skeletal muscle of humans with CHF.

Indexed as

TranscriptomeAgedBiopsyCase-Control StudiesFemaleHeart FailureHumansMaleMitochondrial MyopathiesMitochondria, MuscleMuscle, SkeletalSequence Analysis, RNAchronic heart failuremetabolismmitochondriaskeletal muscle

Identifiers

PMID32892688
PMCPMC7727001
OpenAlexW3083549912

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.