Evidence map›Paper›PMID 32892627›Full record

ArticleJournal of proteome research2020

Isobaric Matching between Runs and Novel PSM-Level Normalization in MaxQuant Strongly Improve Reporter Ion-Based Quantification.

Sung-Huan Yu, Pelagia Kyriakidou, Jürgen Cox

Abstract read
In one paragraph

Article in Journal of proteome research, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed.

  1. Article
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  5. Article
  6. Article
  7. Article
  8. Isobaric Labeling Update in MaxQuant.Journal of proteome research · 2025
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
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  18. PNAS nexus · 2024
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Sung-Huan YuComputational Systems Biochemistry, Max-Planck Institute of Biochemistry, Am Klopferspitz 18, Martinsried 82152, Germany.ORCID 0000-0001-7955-8645
Pelagia KyriakidouComputational Systems Biochemistry, Max-Planck Institute of Biochemistry, Am Klopferspitz 18, Martinsried 82152, Germany.ORCID 0000-0002-1139-715X
Jürgen CoxComputational Systems Biochemistry, Max-Planck Institute of Biochemistry, Am Klopferspitz 18, Martinsried 82152, Germany.ORCID 0000-0001-8597-205X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Isobaric labeling has the promise of combining high sample multiplexing with precise quantification. However, normalization issues and the missing value problem of complete

Indexed as

ProteomicsTandem Mass SpectrometryChromatography, LiquidIonsSoftwareIonsbatch effectsisobaric labelingmatch between runsMaxQuantmissing valuesmultiplexed quantificationnormalizationPerseustandem mass tag

Identifiers

PMID32892627
PMCPMC7586393

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.