Evidence map›Paper›PMID 32891065›Full record

ArticleThe Plant journal : for cell and molecular biology2020

BdWRKY38 is required for the incompatible interaction of Brachypodium distachyon with the necrotrophic fungus Rhizoctonia solani.

Yusuke Kouzai, Minami Shimizu, Komaki Inoue, Yukiko Uehara-Yamaguchi, Kotaro Takahagi, Risa Nakayama, Takakazu Matsuura, Izumi C Mori, Takashi Hirayama, Sobhy S H Abdelsalam and 2 more

Open access · hybridAbstract read
In one paragraph

Article in The Plant journal : for cell and molecular biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
9.5field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 34 citations in OpenAlex.

  1. Review
  2. Article
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  4. Quantitative resistance toFrontiers in plant science · 2026
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  7. Distinct Infection Mechanisms ofLife (Basel, Switzerland) · 2025
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  11. Secreted Glycosyltransferase RsIA_GT ofPathogens (Basel, Switzerland) · 2022
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  12. A Seed-Borne Bacterium of Rice,Life (Basel, Switzerland) · 2022
    Article
  13. Article
  14. Surveillance of Pathogenicity ofLife (Basel, Switzerland) · 2022
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  15. Article
  16. Time-series transcriptome ofFrontiers in plant science · 2022
    Article
  17. Article
  18. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 1 country.

Yusuke KouzaiBioproductivity Informatics Research Team, RIKEN Center for Sustainable Resource Science, 1-7-22 Suehiro-cho, Tsurumi, Yokohama, 230-0045, Japan.ORCID 0000-0002-4481-6189
Minami ShimizuBioproductivity Informatics Research Team, RIKEN Center for Sustainable Resource Science, 1-7-22 Suehiro-cho, Tsurumi, Yokohama, 230-0045, Japan.
Komaki InoueBioproductivity Informatics Research Team, RIKEN Center for Sustainable Resource Science, 1-7-22 Suehiro-cho, Tsurumi, Yokohama, 230-0045, Japan.
Yukiko Uehara-YamaguchiBioproductivity Informatics Research Team, RIKEN Center for Sustainable Resource Science, 1-7-22 Suehiro-cho, Tsurumi, Yokohama, 230-0045, Japan.
Kotaro TakahagiBioproductivity Informatics Research Team, RIKEN Center for Sustainable Resource Science, 1-7-22 Suehiro-cho, Tsurumi, Yokohama, 230-0045, Japan.
Risa NakayamaBioproductivity Informatics Research Team, RIKEN Center for Sustainable Resource Science, 1-7-22 Suehiro-cho, Tsurumi, Yokohama, 230-0045, Japan.
Takakazu MatsuuraInstitute of Plant Science and Resources (IPSR), Okayama University, 2-20-1 Chuo, Kurashiki, 710-0046, Japan.
Izumi C MoriInstitute of Plant Science and Resources (IPSR), Okayama University, 2-20-1 Chuo, Kurashiki, 710-0046, Japan.ORCID 0000-0002-2235-0779
Takashi HirayamaInstitute of Plant Science and Resources (IPSR), Okayama University, 2-20-1 Chuo, Kurashiki, 710-0046, Japan.ORCID 0000-0002-3868-2380
Sobhy S H AbdelsalamGraduate School of Environmental and Life Science, Okayama University, 1-1-1 Tsushimanaka, Okayama, 700-8530, Japan.
Yoshiteru NoutoshiGraduate School of Environmental and Life Science, Okayama University, 1-1-1 Tsushimanaka, Okayama, 700-8530, Japan.ORCID 0000-0001-8140-3722
Keiichi MochidaBioproductivity Informatics Research Team, RIKEN Center for Sustainable Resource Science, 1-7-22 Suehiro-cho, Tsurumi, Yokohama, 230-0045, Japan.ORCID 0000-0003-1299-0024
Kihara Institute for Biological Research · JPOkayama University · JPRIKEN Center for Sustainable Resource Science · JPOkayama University of Science · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Rhizoctonia solani is a soil-borne necrotrophic fungus that causes sheath blight in grasses. The basal resistance of compatible interactions between R. solani and rice is known to be modulated by some WRKY transcription factors (TFs). However, genes and defense responses involved in incompatible interaction with R. solani remain unexplored, because no such interactions are known in any host plants. Recently, we demonstrated that Bd3-1, an accession of the model grass Brachypodium distachyon, is resistant to R. solani and, upon inoculation with the fungus, undergoes rapid induction of genes responsive to the phytohormone salicylic acid (SA) that encode the WRKY TFs BdWRKY38 and BdWRKY44. Here, we show that endogenous SA and these WRKY TFs positively regulate this accession-specific R. solani resistance. In contrast to a susceptible accession (Bd21), the infection process in the resistant accessions Bd3-1 and Tek-3 was suppressed at early stages before the development of fungal biomass and infection machinery. A comparative transcriptome analysis during pathogen infection revealed that putative WRKY-dependent defense genes were induced faster in the resistant accessions than in Bd21. A gene regulatory network (GRN) analysis based on the transcriptome dataset demonstrated that BdWRKY38 was a GRN hub connected to many target genes specifically in resistant accessions, whereas BdWRKY44 was shared in the GRNs of all three accessions. Moreover, overexpression of BdWRKY38 increased R. solani resistance in Bd21. Our findings demonstrate that these resistant accessions can activate an incompatible host response to R. solani, and BdWRKY38 regulates this response by mediating SA signaling.

Indexed as

TranscriptomeBrachypodiumDisease ResistanceGene Expression Regulation, PlantHost-Pathogen InteractionsPlant DiseasesPlant Growth RegulatorsPlant ProteinsRhizoctoniaSalicylic AcidSignal TransductionTranscription FactorsPlant Growth RegulatorsPlant ProteinsSalicylic AcidTranscription FactorsBrachypodium distachyondisease resistanceincompatible interactionRhizoctonia solanisalicylic acidsheath blighttranscriptomeWRKY

Identifiers

PMID32891065
PMCPMC7756360
OpenAlexW3083045779

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.