Evidence map›Paper›PMID 32888502›Full record

ArticleCell chemical biology2020

Designed Parasite-Selective Rhomboid Inhibitors Block Invasion and Clear Blood-Stage Malaria.

Shiv Gandhi, Rosanna P Baker, Sangwoo Cho, Stancho Stanchev, Kvido Strisovsky, Siniša Urban

Open access · bronzeAbstract read
In one paragraph

Article in Cell chemical biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.0field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. AnbioRxiv : the preprint server for biology · 2024
    Article
  8. Article
  9. Article
  10. Targeting theHeliyon · 2022
    Review
  11. Article
  12. Article
  13. In Silico Survey and Characterization ofPathogens (Basel, Switzerland) · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Shiv GandhiDepartment of Molecular Biology & Genetics, Johns Hopkins University School of Medicine, Room 507 PCTB, 725 North Wolfe Street, Baltimore, MD 21205, USA.
Rosanna P BakerDepartment of Molecular Biology & Genetics, Johns Hopkins University School of Medicine, Room 507 PCTB, 725 North Wolfe Street, Baltimore, MD 21205, USA.
Sangwoo ChoDepartment of Molecular Biology & Genetics, Johns Hopkins University School of Medicine, Room 507 PCTB, 725 North Wolfe Street, Baltimore, MD 21205, USA.
Stancho StanchevInstitute of Organic Chemistry and Biochemistry, Academy of Sciences of the Czech Republic, Flemingovo n. 2, Prague 160 00, Czechia.
Kvido StrisovskyInstitute of Organic Chemistry and Biochemistry, Academy of Sciences of the Czech Republic, Flemingovo n. 2, Prague 160 00, Czechia.
Siniša UrbanDepartment of Molecular Biology & Genetics, Johns Hopkins University School of Medicine, Room 507 PCTB, 725 North Wolfe Street, Baltimore, MD 21205, USA. Electronic address: rhomboidprotease@gmail.com.
Johns Hopkins University · USCzech Academy of Sciences, Institute of Organic Chemistry and Biochemistry · CZ

Funding

Overall (pp. 40-62)P41GM103485 · NIGMS · CORNELL UNIVERSITY · PI CERIONE, RICHARD A. · 2012 to 2018
$15.5M
Biochemistry of Intramembrane Proteases From PathogensR01AI066025 · NIAID · JOHNS HOPKINS UNIVERSITY · PI NATHANS, JEREMY · 2005 to 2019
$4.9M
Catalysis In the Membrane: Developing Direct Assays for High-Throughput ScreeningR01AI110925 · NIAID · JOHNS HOPKINS UNIVERSITY · PI URBAN, SINISA · 2015 to 2017
$1.2M
NIAID NIH HHS R01 AI066025NIAID NIH HHS R01 AI110925NIGMS NIH HHS P41 GM103485
6 · The paper itself

Abstract

Rhomboid intramembrane proteases regulate pathophysiological processes, but their targeting in a disease context has never been achieved. We decoded the atypical substrate specificity of malaria rhomboid PfROM4, but found, unexpectedly, that it results from "steric exclusion": PfROM4 and canonical rhomboid proteases cannot cleave each other's substrates due to reciprocal juxtamembrane steric clashes. Instead, we engineered an optimal sequence that enhanced proteolysis >10-fold, and solved high-resolution structures to discover that boronates enhance inhibition >100-fold. A peptide boronate modeled on our "super-substrate" carrying one "steric-excluding" residue inhibited PfROM4 but not human rhomboid proteolysis. We further screened a library to discover an orthogonal alpha-ketoamide that potently inhibited PfROM4 but not human rhomboid proteolysis. Despite the membrane-immersed target and rapid invasion, ultrastructural analysis revealed that single-dosing blood-stage malaria cultures blocked host-cell invasion and cleared parasitemia. These observations establish a strategy for designing parasite-selective rhomboid inhibitors and expose a druggable dependence on rhomboid proteolysis in non-motile parasites.

Indexed as

Drug DesignAmidesAntimalarialsBoronic AcidsHEK293 CellsHumansMalariaMolecular StructureParasitic Sensitivity TestsPeptide HydrolasesPeptidesPlasmodium falciparumProtease InhibitorsProteolysisProtozoan ProteinsAmidesAntimalarialsBoronic AcidsPeptide HydrolasesPeptidesProtease InhibitorsProtozoan ProteinsROM4 protein, Plasmodium falciparumapicomplexan parasitesmalariaPlasmodiumpresenilinRas-converting enzymeregulated intramembrane proteolysisrhomboid proteaseserine proteasesite-2 proteaseToxoplasma

Identifiers

PMID32888502
PMCPMC7680425
OpenAlexW3083324873

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.