Evidence map›Paper›PMID 32886791›Full record

ArticleGlycobiology2021

Site-specific characterization of SARS-CoV-2 spike glycoprotein receptor-binding domain.

Aristotelis Antonopoulos, Steven Broome, Victor Sharov, Christopher Ziegenfuss, Richard L Easton, Maria Panico, Anne Dell, Howard R Morris, Stuart M Haslam

Open access · hybridAbstract read
In one paragraph

Article in Glycobiology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
1.1field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 50 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Glycosylation of SARS-CoV-2: structural and functional insights.Analytical and bioanalytical chemistry · 2021
    Review
  15. The glycosylation in SARS-CoV-2 and its receptor ACE2.Signal transduction and targeted therapy · 2021
    Review
  16. Article
  17. Article
  18. Direct Comparison ofJournal of proteome research · 2021
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Aristotelis AntonopoulosDepartment of Life Sciences, Imperial College London, London, SW7 2AZ, UK.
Steven BroomeBioPharmaSpec Inc, 363 Phoenixville Pike, Malvern, PA 19355, USA.
Victor SharovBioPharmaSpec Inc, 363 Phoenixville Pike, Malvern, PA 19355, USA.
Christopher ZiegenfussBioPharmaSpec Inc, 363 Phoenixville Pike, Malvern, PA 19355, USA.
Richard L EastonBioPharmaSpec Ltd, Suite 3.1, Lido Medical Centre, St. Saviour, Jersey, JE2 7LA, UK.
Maria PanicoDepartment of Life Sciences, Imperial College London, London, SW7 2AZ, UK.
Anne DellDepartment of Life Sciences, Imperial College London, London, SW7 2AZ, UK.
Howard R MorrisDepartment of Life Sciences, Imperial College London, London, SW7 2AZ, UK.
Stuart M HaslamDepartment of Life Sciences, Imperial College London, London, SW7 2AZ, UK.
Imperial College London · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The novel coronavirus SARS-CoV-2, the infective agent causing COVID-19, is having a global impact both in terms of human disease as well as socially and economically. Its heavily glycosylated spike glycoprotein is fundamental for the infection process, via its receptor-binding domains interaction with the glycoprotein angiotensin-converting enzyme 2 on human cell surfaces. We therefore utilized an integrated glycomic and glycoproteomic analytical strategy to characterize both N- and O- glycan site-specific glycosylation within the receptor-binding domain. We demonstrate the presence of complex-type N-glycans with unusual fucosylated LacdiNAc at both sites N331 and N343 and a single site of O-glycosylation on T323.

Indexed as

SARS-CoV-2Angiotensin-Converting Enzyme 2Binding SitesCarbohydrate ConformationCarbohydrate SequenceCOVID-19GlycomicsGlycosylationHEK293 CellsHost Microbial InteractionsHumansPandemicsProtein BindingProtein Interaction Domains and MotifsProteomicsReceptors, VirusACE2 protein, humanAngiotensin-Converting Enzyme 2Receptors, VirusRecombinant ProteinsSpike Glycoprotein, Coronavirusspike protein, SARS-CoV-2glycoproteomicsmass spectrometrySARS-CoV-2spike glycoprotein

Identifiers

PMID32886791
PMCPMC7499654
OpenAlexW3082937621

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.