Evidence map›Paper›PMID 32886660›Full record

ArticlePloS one2020

High-speed imaging of ESCRT recruitment and dynamics during HIV virus like particle budding.

Shilpa Gupta, Josh Bromley, Saveez Saffarian

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 20 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Shilpa GuptaCenter for Cell and Genome Science, University of Utah, Salt Lake City, Utah, United States of America.
Josh BromleyDepartment of Physics and Astronomy, University of Utah, Salt Lake City, Utah, United States of America.
Saveez SaffarianCenter for Cell and Genome Science, University of Utah, Salt Lake City, Utah, United States of America.ORCID 0000-0002-9186-1230
University of Utah · US

Funding

Dynamics of Gag-Pol auto-processing and ESCRT recruitment during HIV buddingR01AI150474 · NIAID · UNIVERSITY OF UTAH · PI SAFFARIAN, SAVEEZ · 2019 to 2021
$974k
NIAID NIH HHS R01 AI150474
6 · The paper itself

Abstract

Endosomal sorting complexes required for transport proteins (ESCRT) catalyze the fission of cellular membranes during budding of membrane away from the cytosol. Here we have used Total Internal Reflection Fluorescence (TIRF) microscopy to visualize the recruitment of ESCRTs specifically, ALIX, CHMP4b and VPS4 onto the budding HIV Gag virus-like particles (VLPs). We imaged the budding VLPs with 200 millisecond time resolution for 300 frames. Our data shows three phases for ESCRT dynamics: 1) recruitment in which subunits of ALIX, CHMP4b and VPS4 are recruited with constant proportions on the budding sites of HIV Gag virus like particles for nearly 10 seconds, followed by 2) disassembly of ALIX and CHMP4b while VPS4 signal remains constant for nearly 20 seconds followed by 3) disassembly of VPS4. We hypothesized that the disassembly observed in step 2 was catalyzed by VPS4 and powered by ATP hydrolysis. To test this hypothesis, we performed ATP depletion using (-) glucose medium, deoxyglucose and oligomycin. Imaging ATP depleted cells, we show that the disassembly of CHMP4b and ALIX observed in step 2 is ATP dependent. ATP depletion resulted in the recruitment of approximately 2-fold as many subunits of all ESCRTs. Resuming ATP production in cells, resulted in disassembly of the full ESCRT machinery which had been locked in place during ATP depletion. With some caveats, our experiments provide insight into the formation of the ESCRT machinery at the budding site of HIV during budding.

Indexed as

Virus ReleaseATPases Associated with Diverse Cellular ActivitiesCalcium-Binding ProteinsCell Cycle ProteinsEndosomal Sorting Complexes Required for Transportgag Gene Products, Human Immunodeficiency VirusHEK293 CellsHeLa CellsHIV-1HIV InfectionsHumansProtein BindingVacuolar Proton-Translocating ATPasesVirionATPases Associated with Diverse Cellular ActivitiesCalcium-Binding ProteinsCell Cycle ProteinsCHMP4B protein, humanEndosomal Sorting Complexes Required for Transportgag Gene Products, Human Immunodeficiency VirusPDCD6IP protein, humanVacuolar Proton-Translocating ATPasesVPS4A protein, human

Identifiers

PMID32886660
PMCPMC7473513
OpenAlexW3083427605

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.