Evidence map›Paper›PMID 32886259›Full record

ArticleExperimental & applied acarology2020

Reference gene validation in Eotetranychus sexmaculatus (Acari: Tetranychidae) feeding on mite-susceptible and mite-resistant rubber tree germplasms.

Xiao Liang, Qing Chen, Chunling Wu, Ying Liu, Yongjun Fang

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Article in Experimental & applied acarology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Pest categorisation ofEFSA journal. European Food Safety Authority · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Xiao LiangEnvironment and Plant Protection Institute, Chinese Academy of Tropical Agriculture Sciences, Haikou, China.
Qing ChenEnvironment and Plant Protection Institute, Chinese Academy of Tropical Agriculture Sciences, Haikou, China. chqingztq@163.com.ORCID http://orcid.org/0000-0003-1549-769X
Chunling WuEnvironment and Plant Protection Institute, Chinese Academy of Tropical Agriculture Sciences, Haikou, China.
Ying LiuEnvironment and Plant Protection Institute, Chinese Academy of Tropical Agriculture Sciences, Haikou, China.
Yongjun FangRubber Research Institute, Chinese Academy of Tropical Agricultural Sciences, Haikou, China.

Funding

Key Research and Development Project of Hainan Province (CN) ZDYF2018037National Natural Science Foundation of China (CN) 31601649Open project of Key Laboratory of rubber tree biology and genetic resources, Ministry of Agriculture and Rural Affairs RRI-KLOF201602
6 · The paper itself

Abstract

Reliable reference genes are quite important in calculating gene transcript levels by using real-time quantitative reverse transcription-PCR (RT-qPCR). Eotetranychus sexmaculatus is known as a dangerous mite causing significant yield reduction of rubber tree latex; however, selection of appropriate reference genes for validation of target gene expression in E. sexmaculatus has not been conducted yet. In the present study, nine candidate reference genes were analyzed for their expression stability in different life stages of E. sexmaculatus by using common algorithms including comparative ΔCq method, geNorm, NormFinder and BestKeeper. In addition, a comprehensive analysis software (RefFinder) was used to assign an overall final rank for each candidate gene. The results showed that β-actin and β-TUB were the best two reference genes and were subjected to evaluate expression of two protective enzyme genes (EsCu/ZnSOD and EsCAT1) in E. sexmaculatus. We found that the expression of EsCu/ZnSOD and EsCAT1 in E. sexmaculatus feeding on mite-resistant rubber tree germplasm was significantly lower compared with those feeding on mite-susceptible germplasm. These results will facilitate research in revealing molecular mechanisms underlying rubber tree resistance to the spider mite.

Indexed as

HeveaTetranychidaeAnimalsFeeding BehaviorGene Expression ProfilingReal-Time Polymerase Chain ReactionEotetranychus sexmaculatusReference geneRubber tree germplasmsValidation of gene expression

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.