Evidence map›Paper›PMID 32883240›Full record

ArticleBMC ophthalmology2020

The mutation spectrum in familial versus sporadic congenital cataract based on next-generation sequencing.

Fan Fan, Yi Luo, Jihong Wu, Chao Gao, Xin Liu, Hengjun Mei, Xiyue Zhou

Open access · goldAbstract read
In one paragraph

Article in BMC ophthalmology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 24 citations in OpenAlex.

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  7. Observational
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  9. NovelInternational journal of molecular sciences · 2023
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  11. Observational
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  13. Roles of the cytoskeleton in human diseases.Molecular biology reports · 2023
    Review
  14. Article
  15. A Novel Mutation inOphthalmology science · 2022
    Article
  16. Article
  17. Article
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Fan FanDepartment of Ophthalmology, Eye and Ear, Nose, and Throat Hospital, Fudan University, Shanghai, China.
Yi LuoDepartment of Ophthalmology, Eye and Ear, Nose, and Throat Hospital, Fudan University, Shanghai, China. yeeluo1106@163.com.ORCID http://orcid.org/0000-0001-5971-1200
Jihong WuDepartment of Ophthalmology, Eye and Ear, Nose, and Throat Hospital, Fudan University, Shanghai, China.
Chao GaoDepartment of Ophthalmology, Eye and Ear, Nose, and Throat Hospital, Fudan University, Shanghai, China.
Xin LiuDepartment of Ophthalmology, Eye and Ear, Nose, and Throat Hospital, Fudan University, Shanghai, China.
Hengjun MeiDepartment of Ophthalmology, Eye and Ear, Nose, and Throat Hospital, Fudan University, Shanghai, China.
Xiyue ZhouDepartment of Ophthalmology, Eye and Ear, Nose, and Throat Hospital, Fudan University, Shanghai, China.
Chinese Academy of Medical Sciences & Peking Union Medical College · CN

Funding

National Natural Science Foundation of China 81870645National Natural Youth Fund of China National Natural Youth Fund
6 · The paper itself

Abstract

backgroundCongenital cataract (CC) is a significant cause of lifelong visual loss, and its genetic diagnosis is challenging due to marked genetic heterogeneity. The purpose of this article is to report the genetic findings in sporadic and familial CC patients.

methodsPatients (n = 53) who were clinically diagnosed with CC and their parents were recruited. Blood samples were collected in our hospital. Mutations were detected by panel-based next-generation DNA sequencing (NGS) targeting 792 genes frequently involved in common inherited eye diseases.

resultsWe identified variants in 10/37 cases (27.02%) of sporadic CC and 14/16 cases (87.5%) of familial CC, which indicated a significant difference (P = 0.000). Of the 13 variants identified in sporadic cases, nine were previously reported mutations, and three were novel mutations, including one de novo mutation (CRYBB2 c.487C > T). The most frequent variants in our cohort were in crystallins and cytoskeletal genes (5/27, 18.52%), followed by proteins associated with X-linked syndromic conditions (14.81%) and transcriptional factors (11.11%). Additional information on the possibility of complications with inherited ocular or systemic diseases other than CC was provided in 17/27 (62.96%) variants.

conclusionsThese results contribute to expanding the mutation spectrum and frequency of genes responsible for CC. Targeted NGS in CC provided significant diagnostic information and enabled more accurate genetic counselling. This study reports the different distributions of mutation genes in familial and sporadic CC cases.

Indexed as

CataractCrystallinsHigh-Throughput Nucleotide SequencingHumansMutationPedigreeCrystallinsCongenital cataractFamilialGene mutationMutation spectrumNext-generation sequencingNGSSporadic

Identifiers

PMID32883240
PMCPMC7469093
OpenAlexW3081654432

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.