Evidence map›Paper›PMID 32882865›Full record

ArticleBiology2020

Deep Learning Neural Network Prediction Method Improves Proteome Profiling of Vascular Sap of Grapevines during Pierce's Disease Development.

Cíntia Helena Duarte Sagawa, Paulo A Zaini, Renata de A B Assis, Houston Saxe, Michelle Salemi, Aaron Jacobson, Phillip A Wilmarth, Brett S Phinney, Abhaya M Dandekar

Open access · goldAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.7field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 3 citations in OpenAlex.

  1. Review
  2. Decoding the Functional Proteome ofPlants (Basel, Switzerland) · 2026
    Review
  3. Review
  4. Review
  5. Article
  6. MALDI-TOF Mass Spectroscopy Applications in Clinical Microbiology.Advances in pharmacological and pharmaceutical sciences · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Cíntia Helena Duarte SagawaDepartment of Plant Sciences, University of California, Davis, 1 Shields Ave, CA 95616, USA.
Paulo A ZainiDepartment of Plant Sciences, University of California, Davis, 1 Shields Ave, CA 95616, USA.
Renata de A B AssisDepartment of Plant Sciences, University of California, Davis, 1 Shields Ave, CA 95616, USA.ORCID 0000-0002-2075-9319
Houston SaxeDepartment of Plant Sciences, University of California, Davis, 1 Shields Ave, CA 95616, USA.
Michelle SalemiProteomics Core Facility, University of California, Davis, 1 Shields Ave, CA 95616, USA.
Aaron JacobsonDepartment of Plant Sciences, University of California, Davis, 1 Shields Ave, CA 95616, USA.
Phillip A WilmarthProteomics Shared Resource, Oregon Health and Science University, Medical Research Building, 3252 SW Research Drive, Portland, OR 97239, USA.
Brett S PhinneyProteomics Core Facility, University of California, Davis, 1 Shields Ave, CA 95616, USA.ORCID 0000-0003-3870-3302
Abhaya M DandekarDepartment of Plant Sciences, University of California, Davis, 1 Shields Ave, CA 95616, USA.ORCID 0000-0001-7925-4086
University of California, Davis · USOregon Health & Science University · USUniversidade Federal de Ouro Preto · BR

Funding

Phinney - Orbitrap Fusion ETDS10OD021801 · OD · UNIVERSITY OF CALIFORNIA AT DAVIS · PI PHINNEY, BRETT S · 2016 to 2016
$600k
California Department of Food and Agriculture Pierce's Disease Board CDFA 14-0136-SANIH HHS S10 OD021801
6 · The paper itself

Abstract

Plant secretome studies highlight the importance of vascular plant defense proteins against pathogens. Studies on Pierce's disease of grapevines caused by the xylem-limited bacterium

Indexed as

apoplastgrapevinePierce’s Diseasepredicted spectral libraryPrositquantitative proteomicssecretomexylem sap

Identifiers

PMID32882865
PMCPMC7565608
OpenAlexW3081838897

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.