Evidence map›Paper›PMID 32882183›Full record

ArticleMolecular cell2020

Genetic Characterization of Three Distinct Mechanisms Supporting RNA-Driven DNA Repair and Modification Reveals Major Role of DNA Polymerase ζ.

Chance Meers, Havva Keskin, Gabor Banyai, Olga Mazina, Taehwan Yang, Alli L Gombolay, Kuntal Mukherjee, Efiyenia I Kaparos, Gary Newnam, Alexander Mazin and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Molecular cell, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 44 citations in OpenAlex.

  1. Targeting mDiscover oncology · 2026
    Review
  2. Review
  3. Article
  4. Article
  5. Advancing Precision Medicine: Recent Innovations in Gene Editing Technologies.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025
    Review
  6. Review
  7. Review
  8. Article
  9. DNA polymerase ζ is a robust reverse transcriptase.bioRxiv : the preprint server for biology · 2024
    Article
  10. Article
  11. How RNA impacts DNA repair.DNA repair · 2023
    Review
  12. Review
  13. Article
  14. Review
  15. Article
  16. Review
  17. Review
  18. Review
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Chance MeersSchool of Biological Sciences, Georgia Institute of Technology, Atlanta, GA 30332, USA.
Havva KeskinSchool of Biological Sciences, Georgia Institute of Technology, Atlanta, GA 30332, USA.
Gabor BanyaiSchool of Biological Sciences, Georgia Institute of Technology, Atlanta, GA 30332, USA.
Olga MazinaDepartment of Biochemistry and Molecular Biology, Drexel University College of Medicine, Philadelphia, PA 19102, USA.
Taehwan YangSchool of Biological Sciences, Georgia Institute of Technology, Atlanta, GA 30332, USA.
Alli L GombolaySchool of Biological Sciences, Georgia Institute of Technology, Atlanta, GA 30332, USA.
Kuntal MukherjeeSchool of Biological Sciences, Georgia Institute of Technology, Atlanta, GA 30332, USA.
Efiyenia I KaparosSchool of Biological Sciences, Georgia Institute of Technology, Atlanta, GA 30332, USA.
Gary NewnamSchool of Biological Sciences, Georgia Institute of Technology, Atlanta, GA 30332, USA.
Alexander MazinDepartment of Biochemistry and Molecular Biology, Drexel University College of Medicine, Philadelphia, PA 19102, USA.
Francesca StoriciSchool of Biological Sciences, Georgia Institute of Technology, Atlanta, GA 30332, USA. Electronic address: storici@gatech.edu.
Georgia Institute of Technology · USDrexel University · US

Funding

X-Ray Crystallography and Macromolecular CharacterizationP30CA056036 · NCI · THOMAS JEFFERSON UNIVERSITY · PI Andrew Chapman · 1995 to 2026
$94.8M
Small Molecule inhibitors as a new approach to study human RAD51 recombinaseR01CA188347 · NCI · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI MAZIN, ALEXANDER V · 2015 to 2019
$2.5M
Mechanisms of RNA-dependent DNA repair in humansR01GM136717 · NIGMS · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI MAZIN, ALEXANDER V · 2020 to 2023
$1.8M
RNA-mediated DNA break repairR01GM115927 · NIGMS · GEORGIA INSTITUTE OF TECHNOLOGY · PI STORICI, FRANCESCA · 2015 to 2018
$1.2M
Howard Hughes Medical Institute 55108574NCI NIH HHS P30 CA056036NCI NIH HHS R01 CA188347NIGMS NIH HHS R01 GM115927NIGMS NIH HHS R01 GM136717
6 · The paper itself

Abstract

DNA double-stranded breaks (DSBs) are dangerous lesions threatening genomic stability. Fidelity of DSB repair is best achieved by recombination with a homologous template sequence. In yeast, transcript RNA was shown to template DSB repair of DNA. However, molecular pathways of RNA-driven repair processes remain obscure. Utilizing assays of RNA-DNA recombination with and without an induced DSB in yeast DNA, we characterize three forms of RNA-mediated genomic modifications: RNA- and cDNA-templated DSB repair (R-TDR and c-TDR) using an RNA transcript or a DNA copy of the RNA transcript for DSB repair, respectively, and a new mechanism of RNA-templated DNA modification (R-TDM) induced by spontaneous or mutagen-induced breaks. While c-TDR requires reverse transcriptase, translesion DNA polymerase ζ (Pol ζ) plays a major role in R-TDR, and it is essential for R-TDM. This study characterizes mechanisms of RNA-DNA recombination, uncovering a role of Pol ζ in transferring genetic information from transcript RNA to DNA.

Indexed as

AdolescentAdultDNADNA Breaks, Double-StrandedDNA, ComplementaryDNA-Directed DNA PolymeraseDNA RepairDNA ReplicationGenomic InstabilityHumansMiddle AgedRad52 DNA Repair and Recombination ProteinRNASaccharomyces cerevisiaeYoung AdultDNADNA, ComplementaryDNA-Directed DNA PolymeraseDNA polymerase zetaRad52 DNA Repair and Recombination ProteinRNAcDNA-mediatedDNA polymerase ζDNA repairhomologous recombinationREV3reverse transcriptaseRNA-mediatedRNA recombinationRNA-templatedtranslesion polymerase

Identifiers

PMID32882183
PMCPMC7502545
OpenAlexW3082315320

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.