Evidence map›Paper›PMID 32882062›Full record

ArticleThe EMBO journal2020

A metabolite binding protein moonlights as a bile-responsive chaperone.

Changhan Lee, Patrick Betschinger, Kevin Wu, Dawid S Żyła, Rudi Glockshuber, James Ca Bardwell

Open access · bronzeAbstract read
In one paragraph

Article in The EMBO journal, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.4field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Stress-Responsive Periplasmic Chaperones in Bacteria.Frontiers in molecular biosciences · 2021
    Review
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Changhan LeeDepartment of Molecular, Cellular, and Developmental Biology, Howard Hughes Medical Institute, University of Michigan, Ann Arbor, MI, USA.ORCID 0000-0002-4375-7391
Patrick BetschingerDepartment of Molecular, Cellular, and Developmental Biology, Howard Hughes Medical Institute, University of Michigan, Ann Arbor, MI, USA.
Kevin WuDepartment of Molecular, Cellular, and Developmental Biology, Howard Hughes Medical Institute, University of Michigan, Ann Arbor, MI, USA.ORCID 0000-0001-5335-9701
Dawid S ŻyłaInstitute of Molecular Biology and Biophysics, Department of Biology, ETH Zurich, Zurich, Switzerland.ORCID 0000-0001-8471-469X
Rudi GlockshuberInstitute of Molecular Biology and Biophysics, Department of Biology, ETH Zurich, Zurich, Switzerland.ORCID 0000-0003-3320-3843
James Ca BardwellDepartment of Molecular, Cellular, and Developmental Biology, Howard Hughes Medical Institute, University of Michigan, Ann Arbor, MI, USA.ORCID 0000-0003-1683-1944
Howard Hughes Medical Institute · USETH Zurich · CH

Funding

Howard Hughes Medical Institute (HHMI)Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung (SNF) 310030B_176403/1Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung (SNF) 31003A_156304
6 · The paper itself

Abstract

Bile salts are secreted into the gastrointestinal tract to aid in the absorption of lipids. In addition, bile salts show potent antimicrobial activity in part by mediating bacterial protein unfolding and aggregation. Here, using a protein folding sensor, we made the surprising discovery that the Escherichia coli periplasmic glycerol-3-phosphate (G3P)-binding protein UgpB can serve, in the absence of its substrate, as a potent molecular chaperone that exhibits anti-aggregation activity against bile salt-induced protein aggregation. The substrate G3P, which is known to accumulate in the later compartments of the digestive system, triggers a functional switch between UgpB's activity as a molecular chaperone and its activity as a G3P transporter. A UgpB mutant unable to bind G3P is constitutively active as a chaperone, and its crystal structure shows that it contains a deep surface groove absent in the G3P-bound wild-type UgpB. Our work illustrates how evolution may be able to convert threats into signals that first activate and then inactivate a chaperone at the protein level in a manner that bypasses the need for ATP.

Indexed as

AmpicillinBileCarrier ProteinsCircular DichroismCrystallography, X-RayDNA Transposable ElementsEscherichia coliEscherichia coli ProteinsGene DeletionGlycerophosphatesHigh-Throughput Nucleotide SequencingHydrogen-Ion ConcentrationMolecular ChaperonesMolecular ConformationMolecular Docking SimulationMutationAmpicillinCarrier ProteinsDNA Transposable ElementsEscherichia coli ProteinsGlycerophosphatesMolecular ChaperonesProteomeUgpB protein, E colichaperoneprotein folding

Identifiers

PMID32882062
PMCPMC7560199
OpenAlexW3082669628

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.