Evidence map›Paper›PMID 32881942›Full record

ArticlePloS one2020

Nystose regulates the response of rice roots to cold stress via multiple signaling pathways: A comparative proteomics analysis.

Zijie Zhang, Wenfei Xiao, Jieren Qiu, Ya Xin, Qinpo Liu, Huizhe Chen, Yaping Fu, Huasheng Ma, Wenyue Chen, Yuqin Huang and 2 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.2field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Review
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  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Zijie ZhangInstitute of Crop Science, Hangzhou Academy of Agricultural Sciences, Hangzhou, China.
Wenfei XiaoInstitute of Crop Science, Hangzhou Academy of Agricultural Sciences, Hangzhou, China.
Jieren QiuInstitute of Crop Science, Hangzhou Academy of Agricultural Sciences, Hangzhou, China.
Ya XinInstitute of Crop Science, Hangzhou Academy of Agricultural Sciences, Hangzhou, China.
Qinpo LiuCollege of Agriculture and Food Science, Zhejiang Agriculture & Forestry University, Hangzhou, China.
Huizhe ChenNational Key Laboratory of Rice Biology, China National Rice Research Institute, Chinese Academy of Agricultural Sciences, Hangzhou, China.
Yaping FuNational Key Laboratory of Rice Biology, China National Rice Research Institute, Chinese Academy of Agricultural Sciences, Hangzhou, China.
Huasheng MaInstitute of Crop Science, Hangzhou Academy of Agricultural Sciences, Hangzhou, China.
Wenyue ChenInstitute of Crop Science, Hangzhou Academy of Agricultural Sciences, Hangzhou, China.
Yuqin HuangInstitute of Crop Science, Hangzhou Academy of Agricultural Sciences, Hangzhou, China.ORCID 0000-0003-0608-827X
Songlin RuanInstitute of Crop Science, Hangzhou Academy of Agricultural Sciences, Hangzhou, China.ORCID 0000-0003-3010-3134
Jianli YanInstitute of Crop Science, Hangzhou Academy of Agricultural Sciences, Hangzhou, China.
Hangzhou Academy of Agricultural Sciences · CNZhejiang A & F University · CNChinese Academy of Agricultural Sciences · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Small fructans improve plant tolerance for cold stress. However, the underlying molecular mechanisms are poorly understood. Here, we have demonstrated that the small fructan tetrasaccharide nystose improves the cold stress tolerance of primary rice roots. Roots developed from seeds soaked in nystose showed lower browning rate, higher root activity, and faster growth compared to seeds soaked in water under chilling stress. Comparative proteomics analysis of nystose-treated and control roots identified a total of 497 differentially expressed proteins. GO classification and KEGG pathway analysis documented that some of the upregulated differentially expressed proteins were implicated in the regulation of serine/threonine protein phosphatase activity, abscisic acid-activated signaling, removal of superoxide radicals, and the response to oxidative stress and defense responses. Western blot analysis indicated that nystose promotes the growth of primary rice roots by increasing the level of RSOsPR10, and the cold stress-induced change in RSOsPR10levelis regulated by jasmonate, salicylic acid, and abscisic acid signaling pathways in rice roots. Furthermore, OsMKK4-dependentmitogen-activated protein kinase signaling cascades may be involved in the nystose-induced cold tolerance of primary rice roots. Together, these results indicate that nystose acts as an immunostimulator of the response to cold stress by multiple signaling pathways.

Indexed as

Abscisic AcidChromatography, High Pressure LiquidCold-Shock ResponseCyclopentanesGene Expression Regulation, PlantOligosaccharidesOryzaOxylipinsPhenotypePlant ProteinsPlant RootsProteomicsSalicylic AcidSignal TransductionTandem Mass SpectrometryAbscisic AcidCyclopentanesfungitetraosejasmonic acidOligosaccharidesOxylipinsPlant ProteinsSalicylic Acid

Identifiers

PMID32881942
PMCPMC7470417
OpenAlexW3083436913

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.