Evidence map›Paper›PMID 32881488›Full record

ArticleJournal of the American Chemical Society2020

Arene Substitution Design for Controlled Conformational Changes of Dibenzocycloocta-1,5-dienes.

Wenxin Fu, Todd M Alam, Jiachen Li, Jacqueline Bustamante, Thanh Lien, Ralph W Adams, Simon J Teat, Benjamin J Stokes, Weitao Yang, Yi Liu and 1 more

Open access · greenAbstract read
In one paragraph

Article in Journal of the American Chemical Society, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.9field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 18 citations in OpenAlex.

  1. A Durable Metal-Organic Framework with a Hydrophobic spSmall (Weinheim an der Bergstrasse, Germany) · 2026
    Article
  2. Synthesis and crystal structure of 2,9-di-amino-5,6,11,12-tetra-hydro-dibenzo[Acta crystallographica. Section E, Crystallographic communications · 2024
    Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 2 countries.

Wenxin FuMaterials Science and Engineering, School of Engineering, University of California, Merced, 5200 North Lake Road, Merced, California 95343, United States.
Todd M AlamDepartment of Organic Material Sciences, Sandia National Laboratories, Albuquerque, New Mexico 87185, United States.ORCID 0000-0002-1047-1231
Jiachen LiDepartment of Chemistry and Department of Physics, Duke University, Durham, North Carolina 27708, United States.
Jacqueline BustamanteMaterials Science and Engineering, School of Engineering, University of California, Merced, 5200 North Lake Road, Merced, California 95343, United States.
Thanh LienDepartment of Chemistry and Chemical Biology, University of California, Merced, 5200 North Lake Road, Merced, California 95343, United States.
Ralph W AdamsDepartment of Chemistry, The University of Manchester, Oxford Road, Manchester M13 9PL, United Kingdom.ORCID 0000-0001-8009-5334
Simon J TeatAdvanced Light Source, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States.
Benjamin J StokesDepartment of Chemistry and Chemical Biology, University of California, Merced, 5200 North Lake Road, Merced, California 95343, United States.ORCID 0000-0002-5982-654X
Weitao YangDepartment of Chemistry and Department of Physics, Duke University, Durham, North Carolina 27708, United States.ORCID 0000-0001-5576-2828
Yi LiuThe Molecular Foundry, Lawrence Berkeley National Laboratory, One Cyclotron Road, Berkeley, California 94720, United States.ORCID 0000-0002-3954-6102
Jennifer Q LuMaterials Science and Engineering, School of Engineering, University of California, Merced, 5200 North Lake Road, Merced, California 95343, United States.
University of California, Merced · USDuke University · USLawrence Berkeley National Laboratory · USSandia National Laboratories · USUniversity of Manchester · GB

Funding

COMPUTER SIMULATIONS OF ENZYMES AND DNAR01GM061870 · NIGMS · DUKE UNIVERSITY · PI YANG, WEITAO · 2000 to 2022
$5.5M
NIGMS NIH HHS R01 GM061870
6 · The paper itself

Abstract

We report that an agile eight-membered cycloalkane can be stabilized by fusing a benzene ring on each side, substituted with proper functional groups. The conformational change of dibenzocycloocta-1,5-diene (DBCOD), a rigid-flexible-rigid organic moiety, from its Boat to Chair conformation requires an activation energy of 42 kJ/mol, which is substantially lower than those of existing submolecular shape-changing units. Experimental data corroborated by theoretical calculations demonstrate that intramolecular hydrogen bonding can stabilize Boat, whereas electron repulsive interaction from opposing ester substituents favors Chair. Intramolecular hydrogen bonding formed by 1,10-diamide substitution stabilizes Boat, spiking the temperature at which Boat and Chair can readily interchange from -60 to 60 °C. Concomitantly this intramolecular attraction raises the energy barrier from 42 kJ/mol for unsubstituted DBCOD to 68 kJ/mol for diamide-substituted DBCOD. Remarkably, this value falls within the range of the activation energy of highly efficient enzyme-catalyzed biological reactions. With shape changes once considered only possible with high energy, our work reveals a potential pathway exemplified by a specific submolecular structure to achieve low-energy-driven shape changes for the first time. The intrinsic cycle stability and high-energy output systems that would incur damage under high-energy stimuli could particularly benefit from this new kind of low-energy-driven shape-changing mechanism. This work has laid the basis to construct systems for low-energy-driven stimuli-responsive applications, hitherto a challenge to overcome.

Identifiers

PMID32881488
PMCPMC8341137
OpenAlexW3083113643

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.