Evidence map›Paper›PMID 32880770›Full record

ReviewJournal of industrial microbiology & biotechnology2020

Synthetic biology, combinatorial biosynthesis, and chemo‑enzymatic synthesis of isoprenoids.

Alexandra A Malico, Miles A Calzini, Anuran K Gayen, Gavin J Williams

Erratum issuedOpen access · bronzeAbstract readReview
In one paragraph

Review in Journal of industrial microbiology & biotechnology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 21 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Review
  6. Article
  7. High Versatility of IPP and DMAPP Methyltransferases Enables Synthesis of CChembiochem : a European journal of chemical biology · 2022
    Article
  8. ACS chemical biology · 2022
    Article
  9. Review
  10. Article
  11. Review
  12. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Alexandra A MalicoDepartment of Chemistry, NC State University, Raleigh, NC, 27695, USA.
Miles A CalziniDepartment of Chemistry, NC State University, Raleigh, NC, 27695, USA.
Anuran K GayenDepartment of Chemistry, NC State University, Raleigh, NC, 27695, USA.
Gavin J WilliamsDepartment of Chemistry, NC State University, Raleigh, NC, 27695, USA. gjwillia@ncsu.edu.ORCID http://orcid.org/0000-0003-2172-9063
North Carolina State University · USNorth Central State College · US

Funding

Designer biosensors for directed evolution of macrolide biosynthetic enzymesR01GM124112 · NIGMS · NORTH CAROLINA STATE UNIVERSITY RALEIGH · PI CROPP, THOMAS ASHTON, WILLIAMS, GAVIN J · 2018 to 2021
$1.1M
NIGMS NIH HHS R01 GM124112North Carolina State University Thomas Lord Distinguished Professorship Endowment
6 · The paper itself

Abstract

Isoprenoids are a large class of natural products with myriad applications as bioactive and commercial compounds. Their diverse structures are derived from the biosynthetic assembly and tailoring of their scaffolds, ultimately constructed from two C5 hemiterpene building blocks. The modular logic of these platforms can be harnessed to improve titers of valuable isoprenoids in diverse hosts and to produce new-to-nature compounds. Often, this process is facilitated by the substrate or product promiscuity of the component enzymes, which can be leveraged to produce novel isoprenoids. To complement rational enhancements and even re-programming of isoprenoid biosynthesis, high-throughput approaches that rely on searching through large enzymatic libraries are being developed. This review summarizes recent advances and strategies related to isoprenoid synthetic biology, combinatorial biosynthesis, and chemo-enzymatic synthesis, focusing on the past 5 years. Emerging applications of cell-free biosynthesis and high-throughput tools are included that culminate in a discussion of the future outlook and perspective of isoprenoid biosynthetic engineering.

Indexed as

Synthetic BiologyTerpenesBiological ProductsHemiterpenesBiological ProductsHemiterpenesTerpenesCombinatorial biosynthesisHemiterpenesIsoprenoidsSynthetic biologyTerpenes

Identifiers

PMID32880770
PMCPMC7666032
OpenAlexW3083139834

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.