Evidence map›Paper›PMID 32879944›Full record

ArticleHuman molecular genetics2020

Conserved UBE3A subcellular distribution between human and mice is facilitated by non-homologous isoforms.

F Isabella Zampeta, Monica Sonzogni, Eva Niggl, Bas Lendemeijer, Hilde Smeenk, Femke M S de Vrij, Steven A Kushner, Ben Distel, Ype Elgersma

Open access · greenAbstract read
In one paragraph

Article in Human molecular genetics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.6field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 26 citations in OpenAlex.

  1. Article
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  6. Review
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  8. Article
  9. Identification of Novel Genes for Cell Fusion during Osteoclast Formation.International journal of molecular sciences · 2022
    Article
  10. Article
  11. Article
  12. UBE3A reinstatement as a disease-modifying therapy for Angelman syndrome.Developmental medicine and child neurology · 2021
    Review
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

F Isabella ZampetaDepartment of Neuroscience, Erasmus University Medical Center, 3015 GD Rotterdam, The Netherlands.
Monica SonzogniDepartment of Neuroscience, Erasmus University Medical Center, 3015 GD Rotterdam, The Netherlands.
Eva NigglDepartment of Neuroscience, Erasmus University Medical Center, 3015 GD Rotterdam, The Netherlands.
Bas LendemeijerDepartment of Psychiatry, Erasmus University Medical Center, 3015 GD Rotterdam, The Netherlands.
Hilde SmeenkDepartment of Psychiatry, Erasmus University Medical Center, 3015 GD Rotterdam, The Netherlands.
Femke M S de VrijDepartment of Psychiatry, Erasmus University Medical Center, 3015 GD Rotterdam, The Netherlands.
Steven A KushnerENCORE Expertise Center for Neurodevelopmental Disorders, Erasmus University Medical Center, 3015 GD Rotterdam, The Netherlands.
Ben DistelDepartment of Neuroscience, Erasmus University Medical Center, 3015 GD Rotterdam, The Netherlands.
Ype ElgersmaDepartment of Neuroscience, Erasmus University Medical Center, 3015 GD Rotterdam, The Netherlands.
Erasmus MC · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The human UBE3A gene, which is essential for normal neurodevelopment, encodes three Ubiquitin E3 ligase A (UBE3A) protein isoforms. However, the subcellular localization and relative abundance of these human UBE3A isoforms are unknown. We found, as previously reported in mice, that UBE3A is predominantly nuclear in human neurons. However, this conserved subcellular distribution is achieved by strikingly distinct cis-acting mechanisms. A single amino-acid deletion in the N-terminus of human hUBE3A-Iso3, which is homologous to cytosolic mouse mUBE3A-Iso2, results in its translocation to the nucleus. This singe amino-acid deletion is shared with apes and Old World monkeys and was preceded by the appearance of the cytosolic hUBE3A-Iso2 isoform. This hUBE3A-Iso2 isoform arose after the lineage of New World monkeys and Old World monkeys separated from the Tarsiers (Tarsiidae). Due to the loss of a single nucleotide in a non-coding exon, this exon became in frame with the remainder of the UBE3A protein. RNA-seq analysis of human brain samples showed that the human UBE3A isoforms arise by alternative splicing. Consistent with the predominant nuclear enrichment of UBE3A in human neurons, the two nuclear-localized isoforms, hUBE3A-Iso1 and -Iso3, are the most abundantly expressed isoforms of UBE3A, while hUBE3A-Iso2 maintains a small pool of cytosolic UBE3A. Our findings provide new insight into UBE3A localization and evolution and may have important implications for gene therapy approaches in Angelman syndrome.

Indexed as

Alternative SplicingAngelman SyndromeAnimalsBrainGenomic ImprintingHumansMiceNeuronsProtein IsoformsUbiquitin-Protein LigasesProtein IsoformsUBE3A protein, humanUbe3a protein, mouseUbiquitin-Protein Ligases

Identifiers

PMID32879944
PMCPMC7645710
OpenAlexW3083443219

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.