Evidence map›Paper›PMID 32878892›Full record

ArticleJournal of virology2020

Retinoic Acid Inducible Gene I and Protein Kinase R, but Not Stress Granules, Mediate the Proinflammatory Response to Yellow Fever Virus.

Guillaume Beauclair, Felix Streicher, Maxime Chazal, Daniela Bruni, Sarah Lesage, Ségolène Gracias, Salomé Bourgeau, Laura Sinigaglia, Takashi Fujita, Eliane F Meurs and 2 more

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
2.9field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 27 citations in OpenAlex.

  1. Article
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  3. Review
  4. Article
  5. Article
  6. Review
  7. Emerging roles of stress granules in liver diseases: a comprehensive review.Frontiers in cell and developmental biology · 2025
    Review
  8. Article
  9. Review
  10. Review
  11. Review
  12. Review
  13. Review
  14. Article
  15. Review
  16. Viruses · 2022
    Review
  17. dsRNA-induced condensation of antiviral proteins modulates PKR activity.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 2 countries.

Guillaume BeauclairDepartment of Virology, Institut Pasteur, UMR3569 CNRS, Paris, France.ORCID 0000-0001-5323-5987
Felix StreicherDepartment of Virology, Institut Pasteur, UMR3569 CNRS, Paris, France.
Maxime ChazalDepartment of Virology, Institut Pasteur, UMR3569 CNRS, Paris, France.
Daniela BruniDepartment of Virology, Institut Pasteur, UMR3569 CNRS, Paris, France.
Sarah LesageDepartment of Virology, Institut Pasteur, UMR3569 CNRS, Paris, France.
Ségolène GraciasDepartment of Virology, Institut Pasteur, UMR3569 CNRS, Paris, France.
Salomé BourgeauDepartment of Virology, Institut Pasteur, UMR3569 CNRS, Paris, France.
Laura SinigagliaDepartment of Virology, Institut Pasteur, UMR3569 CNRS, Paris, France.
Takashi FujitaDepartment of Virus Research, Institute for Frontier Life and Medical Sciences, Kyoto University, Kyoto, Japan.
Eliane F MeursDepartment of Virology, Institut Pasteur, UMR3569 CNRS, Paris, France.
Frédéric TangyDepartment of Virology, Institut Pasteur, UMR3569 CNRS, Paris, France.
Nolwenn JouvenetDepartment of Virology, Institut Pasteur, UMR3569 CNRS, Paris, France nolwenn.jouvenet@pasteur.fr.ORCID 0000-0001-6103-6048
Centre National de la Recherche Scientifique · FRKyoto University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Yellow fever virus (YFV) is an RNA virus primarily targeting the liver. Severe YF cases are responsible for hemorrhagic fever, plausibly precipitated by excessive proinflammatory cytokine response. Pathogen recognition receptors (PRRs), such as the cytoplasmic retinoic acid inducible gene I (RIG-I)-like receptors (RLRs), and the viral RNA sensor protein kinase R (PKR), are known to initiate a proinflammatory response upon recognition of viral genomes. Here, we sought to reveal the main determinants responsible for the acute cytokine expression occurring in human hepatocytes following YFV infection. Using a RIG-I-defective human hepatoma cell line, we found that RIG-I largely contributes to cytokine secretion upon YFV infection. In infected RIG-I-proficient hepatoma cells, RIG-I was localized in stress granules. These granules are large aggregates of stalled translation preinitiation complexes known to concentrate RLRs and PKR and are so far recognized as hubs orchestrating RNA virus sensing. Stable knockdown of PKR in hepatoma cells revealed that PKR contributes to both stress granule formation and cytokine induction upon YFV infection. However, stress granule disruption did not affect the cytokine response to YFV infection, as assessed by small interfering RNA (siRNA)-knockdown-mediated inhibition of stress granule assembly. Finally, no viral RNA was detected in stress granules using a fluorescence

Indexed as

Adaptor Proteins, Signal TransducingAnimalsCarcinoma, HepatocellularCell LineCell Line, TumorCytokinesDEAD Box Protein 58DNA HelicaseseIF-2 KinaseGene Knockdown TechniquesHaplorhiniHepatocytesHumansPoly-ADP-Ribose Binding ProteinsReceptors, ImmunologicRNA-Binding ProteinsAdaptor Proteins, Signal TransducingCytokinesDEAD Box Protein 58DNA HelicasesEIF2AK2 protein, humaneIF-2 KinaseG3BP1 protein, humanG3BP2 protein, humanPoly-ADP-Ribose Binding ProteinsReceptors, ImmunologicRIGI protein, humanRNA-Binding ProteinsRNA HelicasesRNA Recognition Motif ProteinsRNA, Small InterferingRNA, ViralT-Cell Intracellular Antigen-1TIA1 protein, humanTIAL1 protein, humancytokinesflavivirusinnate immunityinterferonsliver inflammationpattern recognition receptorsstress granulesyellow fever virus

Identifiers

PMID32878892
PMCPMC7592215
OpenAlexW3082507119

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.