Evidence map›Paper›PMID 32877699›Full record

ArticleCell2020

Loss of Bcl-6-Expressing T Follicular Helper Cells and Germinal Centers in COVID-19.

Naoki Kaneko, Hsiao-Hsuan Kuo, Julie Boucau, Jocelyn R Farmer, Hugues Allard-Chamard, Vinay S Mahajan, Alicja Piechocka-Trocha, Kristina Lefteri, Matthew Osborn, Julia Bals and 42 more

Open access · bronzeAbstract read
In one paragraph

Article in Cell, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 499 papers.

0numbers the graph read from it
0cells of the map it votes in
499citing papers in PubMed
16.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

499 citing papers in PubMed, 767 citations in OpenAlex.

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439 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

52 authors at 5 institutions in 2 countries.

Naoki KanekoRagon Institute of MGH, MIT and Harvard, Cambridge, MA 02139, USA.
Hsiao-Hsuan KuoRagon Institute of MGH, MIT and Harvard, Cambridge, MA 02139, USA.
Julie BoucauRagon Institute of MGH, MIT and Harvard, Cambridge, MA 02139, USA.
Jocelyn R FarmerRagon Institute of MGH, MIT and Harvard, Cambridge, MA 02139, USA.
Hugues Allard-ChamardRagon Institute of MGH, MIT and Harvard, Cambridge, MA 02139, USA; Division of Rheumatology, Faculté de Médecine et des Sciences de la Santé de l'Université de Sherbrooke et Centre de Recherche Clinique Étienne-Le Bel, Sherbrooke, QC J1K 2R1, Canada.
Vinay S MahajanRagon Institute of MGH, MIT and Harvard, Cambridge, MA 02139, USA; Department of Pathology, Brigham and Women's Hospital, Boston, MA 02115, USA.
Alicja Piechocka-TrochaRagon Institute of MGH, MIT and Harvard, Cambridge, MA 02139, USA; Howard Hughes Medical Institute, Chevy Chase, MD 20815, USA.
Kristina LefteriRagon Institute of MGH, MIT and Harvard, Cambridge, MA 02139, USA.
Matthew OsbornRagon Institute of MGH, MIT and Harvard, Cambridge, MA 02139, USA.
Julia BalsRagon Institute of MGH, MIT and Harvard, Cambridge, MA 02139, USA.
Yannic C BartschRagon Institute of MGH, MIT and Harvard, Cambridge, MA 02139, USA.
Nathalie BonheurRagon Institute of MGH, MIT and Harvard, Cambridge, MA 02139, USA.
Timothy M CaradonnaRagon Institute of MGH, MIT and Harvard, Cambridge, MA 02139, USA.
Josh ChevalierRagon Institute of MGH, MIT and Harvard, Cambridge, MA 02139, USA.
Fatema ChowdhuryRagon Institute of MGH, MIT and Harvard, Cambridge, MA 02139, USA.
Thomas J DiefenbachRagon Institute of MGH, MIT and Harvard, Cambridge, MA 02139, USA.
Kevin EinkaufRagon Institute of MGH, MIT and Harvard, Cambridge, MA 02139, USA.
Jon FallonRagon Institute of MGH, MIT and Harvard, Cambridge, MA 02139, USA.
Jared FeldmanRagon Institute of MGH, MIT and Harvard, Cambridge, MA 02139, USA.
Kelsey K FinnRagon Institute of MGH, MIT and Harvard, Cambridge, MA 02139, USA.
Pilar Garcia-BroncanoRagon Institute of MGH, MIT and Harvard, Cambridge, MA 02139, USA.
Ciputra Adijaya HartanaRagon Institute of MGH, MIT and Harvard, Cambridge, MA 02139, USA.
Blake M HauserRagon Institute of MGH, MIT and Harvard, Cambridge, MA 02139, USA.
Chenyang JiangRagon Institute of MGH, MIT and Harvard, Cambridge, MA 02139, USA.
Paulina KaplonekRagon Institute of MGH, MIT and Harvard, Cambridge, MA 02139, USA.
Marshall KarpellRagon Institute of MGH, MIT and Harvard, Cambridge, MA 02139, USA.
Eric C KoscherRagon Institute of MGH, MIT and Harvard, Cambridge, MA 02139, USA.
Xiaodong LianRagon Institute of MGH, MIT and Harvard, Cambridge, MA 02139, USA.
Hang LiuRagon Institute of MGH, MIT and Harvard, Cambridge, MA 02139, USA.
Jinqing LiuRagon Institute of MGH, MIT and Harvard, Cambridge, MA 02139, USA.
Ngoc L LyRagon Institute of MGH, MIT and Harvard, Cambridge, MA 02139, USA.
Ashlin R MichellRagon Institute of MGH, MIT and Harvard, Cambridge, MA 02139, USA.
Yelizaveta RassadkinaRagon Institute of MGH, MIT and Harvard, Cambridge, MA 02139, USA.
Kyra SeigerRagon Institute of MGH, MIT and Harvard, Cambridge, MA 02139, USA.
Libera SessaRagon Institute of MGH, MIT and Harvard, Cambridge, MA 02139, USA.
Sally ShinRagon Institute of MGH, MIT and Harvard, Cambridge, MA 02139, USA.
Nishant SinghRagon Institute of MGH, MIT and Harvard, Cambridge, MA 02139, USA.
Weiwei SunRagon Institute of MGH, MIT and Harvard, Cambridge, MA 02139, USA.
Xiaoming SunRagon Institute of MGH, MIT and Harvard, Cambridge, MA 02139, USA.
Hannah J TicheliRagon Institute of MGH, MIT and Harvard, Cambridge, MA 02139, USA.
Michael T WaringRagon Institute of MGH, MIT and Harvard, Cambridge, MA 02139, USA; Howard Hughes Medical Institute, Chevy Chase, MD 20815, USA.
Alex L ZhuRagon Institute of MGH, MIT and Harvard, Cambridge, MA 02139, USA.
Galit AlterRagon Institute of MGH, MIT and Harvard, Cambridge, MA 02139, USA.
Jonathan Z LiDepartment of Medicine, Brigham and Women's Hospital, Boston, MA 02115, USA.
Daniel LingwoodRagon Institute of MGH, MIT and Harvard, Cambridge, MA 02139, USA.
Aaron G SchmidtRagon Institute of MGH, MIT and Harvard, Cambridge, MA 02139, USA; Department of Microbiology, Harvard Medical School, Boston, MA 02115, USA.
Mathias LichterfeldRagon Institute of MGH, MIT and Harvard, Cambridge, MA 02139, USA; Department of Medicine, Brigham and Women's Hospital, Boston, MA 02115, USA.
Bruce D WalkerRagon Institute of MGH, MIT and Harvard, Cambridge, MA 02139, USA; Howard Hughes Medical Institute, Chevy Chase, MD 20815, USA; Department of Biology and Institute of Medical Engineering and Science, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.
Xu G YuRagon Institute of MGH, MIT and Harvard, Cambridge, MA 02139, USA; Department of Medicine, Brigham and Women's Hospital, Boston, MA 02115, USA.
Robert F PaderaDepartment of Pathology, Brigham and Women's Hospital, Boston, MA 02115, USA. Electronic address: rpadera@bwh.harvard.edu.
Shiv PillaiRagon Institute of MGH, MIT and Harvard, Cambridge, MA 02139, USA. Electronic address: pillai@helix.mgh.harvard.edu.
Massachusetts Consortium on Pathogen Readiness Specimen Working Group
Ragon Institute of MGH, MIT and Harvard · USBrigham and Women's Hospital · USHoward Hughes Medical Institute · USHarvard University · USUniversité de Sherbrooke · CA

Funding

Using a tonsil organoid system to probe conditions for the induction of protective antibody and T cell responses to influenza.U19AI057229 · NIAID · STANFORD UNIVERSITY · PI Mark Morris Davis · 2003 to 2026
$88.5M
Medical Scientist Training ProgramT32GM007753 · NIGMS · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI WALENSKY, LOREN DAVID · 1985 to 2021
$50.0M
Pilot & Feasibility ProgramP30DK043351 · NIDDK · MASSACHUSETTS GENERAL HOSPITAL · PI Ramnik J Xavier · 1991 to 2026
$35.3M
MOLECULAR BIOPHYSICS TRAINING GRANTT32GM008313 · NIGMS · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI MURTHY, VENKATESH N · 1989 to 2023
$14.6M
MOLECULAR BASIS OF VIRAL INFECTIVITYT32AI007245 · NIAID · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI Aaron Gregory Schmidt · 1985 to 2026
$11.3M
The importance of the IgG4 glycome in IgG4-related disease(s)U19AI110495 · NIAID · MASSACHUSETTS GENERAL HOSPITAL · PI Ramnik J Xavier · 2014 to 2026
$7.9M
TRAINING IN TRANSPLANTATION BIOLOGYT32AI007529 · NIAID · MASSACHUSETTS GENERAL HOSPITAL · PI MADSEN, JOREN C · 1998 to 2024
$6.4M
Epitope focusing to the receptor binding motif for a universal coronavirus vaccineR01AI146779 · NIAID · MASSACHUSETTS GENERAL HOSPITAL · PI SCHMIDT, AARON GREGORY · 2019 to 2023
$4.2M
Innate-like BCR activity as a template for universal vaccination against influenza virusR01AI137057 · NIAID · MASSACHUSETTS GENERAL HOSPITAL · PI CHACKERIAN, BRYCE C, LINGWOOD, DANIEL · 2018 to 2022
$2.6M
Defining and Exploiting a Genetic Template for an HIV VaccineDP2DA042422 · NIDA · MASSACHUSETTS GENERAL HOSPITAL · PI LINGWOOD, DANIEL · 2016 to 2016
$2.6M
Triggering germline-encoded broadly neutralizing antibody responses against influenza virusR01AI153098 · NIAID · MASSACHUSETTS GENERAL HOSPITAL · PI BATISTA, FACUNDO DAMIAN, LINGWOOD, DANIEL · 2020 to 2023
$2.1M
CDRH3-independent B cell stimulation to selectively expand VRC01 lineages from a fully humanized immunoglobulin repertoireR01AI124378 · NIAID · MASSACHUSETTS GENERAL HOSPITAL · PI CHACKERIAN, BRYCE C, LINGWOOD, DANIEL · 2017 to 2020
$2.0M
NIAID NIH HHS R01 AI124378NIAID NIH HHS R01 AI137057NIAID NIH HHS R01 AI146779NIAID NIH HHS R01 AI153098NIAID NIH HHS R01 AI155447NIAID NIH HHS T32 AI007245NIAID NIH HHS T32 AI007529NIAID NIH HHS U19 AI057229NIAID NIH HHS U19 AI110495NIDA NIH HHS DP2 DA042422NIDDK NIH HHS P30 DK043351NIGMS NIH HHS T32 GM007753NIGMS NIH HHS T32 GM008313NINDS NIH HHS F30 NS065566
6 · The paper itself

Abstract

Humoral responses in coronavirus disease 2019 (COVID-19) are often of limited durability, as seen with other human coronavirus epidemics. To address the underlying etiology, we examined post mortem thoracic lymph nodes and spleens in acute SARS-CoV-2 infection and observed the absence of germinal centers and a striking reduction in Bcl-6

Indexed as

AgedAged, 80 and overB-LymphocytesCoronavirus InfectionsCOVID-19FemaleGerminal CenterHumansMaleMiddle AgedPandemicsPneumonia, ViralProto-Oncogene Proteins c-bcl-6SpleenT-Lymphocytes, Helper-InducerTumor Necrosis Factor-alphaBCL6 protein, humanProto-Oncogene Proteins c-bcl-6Tumor Necrosis Factor-alphaCOVID-19cytokine dysregulationdouble-negative B cellsextra-follicular B cellsgerminal centershumoral immunityplasmablastsSARS-CoV-2T follicular helper cellsTNF-α

Identifiers

PMID32877699
PMCPMC7437499
OpenAlexW3049048202

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.