Evidence map›Paper›PMID 32873711›Full record

ArticleThe Journal of biological chemistry2020

Replication stress at microsatellites causes DNA double-strand breaks and break-induced replication.

Rujuta Yashodhan Gadgil, Eric J Romer, Caitlin C Goodman, S Dean Rider, French J Damewood, Joanna R Barthelemy, Kazuo Shin-Ya, Helmut Hanenberg, Michael Leffak

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 39 citations in OpenAlex.

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  17. Revisiting mutagenesis at non-B DNA motifs in the human genome.Nature structural & molecular biology · 2023
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  18. Article
  19. Genomic Organization of Microsatellites andAnimals : an open access journal from MDPI · 2022
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  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 3 countries.

Rujuta Yashodhan GadgilDepartment of Biochemistry and Molecular Biology, Boonshoft School of Medicine, Wright State University, Dayton, Ohio, USA.
Eric J RomerDepartment of Biochemistry and Molecular Biology, Boonshoft School of Medicine, Wright State University, Dayton, Ohio, USA.
Caitlin C GoodmanDepartment of Biochemistry and Molecular Biology, Boonshoft School of Medicine, Wright State University, Dayton, Ohio, USA.
S Dean RiderDepartment of Biochemistry and Molecular Biology, Boonshoft School of Medicine, Wright State University, Dayton, Ohio, USA.
French J DamewoodDepartment of Biochemistry and Molecular Biology, Boonshoft School of Medicine, Wright State University, Dayton, Ohio, USA.
Joanna R BarthelemyDepartment of Biochemistry and Molecular Biology, Boonshoft School of Medicine, Wright State University, Dayton, Ohio, USA.
Kazuo Shin-YaBiomedical Information Research Center, National Institute of Advanced Industrial Science and Technology, Tokyo, Japan.
Helmut HanenbergDepartment of Otorhinolaryngology and Head/Neck Surgery, Heinrich Heine University, Düsseldorf, Germany; Department of Pediatrics III, University Children's Hospital Essen, University of Duisburg-Essen, Essen, Germany.
Michael LeffakDepartment of Biochemistry and Molecular Biology, Boonshoft School of Medicine, Wright State University, Dayton, Ohio, USA. Electronic address: Michael.leffak@wright.edu.
Wright State University · USDüsseldorf University Hospital · DENational Institute of Advanced Industrial Science and Technology · JP

Funding

Mechanisms of Replication-Dependent Microsatellite Instability in Human DiseaseR01GM122976 · NIGMS · WRIGHT STATE UNIVERSITY · PI LEFFAK, MICHAEL · 2017 to 2020
$1.2M
NIGMS NIH HHS R01 GM122976
6 · The paper itself

Abstract

Short tandemly repeated DNA sequences, termed microsatellites, are abundant in the human genome. These microsatellites exhibit length instability and susceptibility to DNA double-strand breaks (DSBs) due to their tendency to form stable non-B DNA structures. Replication-dependent microsatellite DSBs are linked to genome instability signatures in human developmental diseases and cancers. To probe the causes and consequences of microsatellite DSBs, we designed a dual-fluorescence reporter system to detect DSBs at expanded (CTG/CAG)

Indexed as

DNA Breaks, Double-StrandedDNADNA-Binding ProteinsDNA ReplicationEndonucleasesHeLa CellsHumansMicrosatellite RepeatsTumor Cells, CulturedDNADNA-Binding ProteinsEndonucleasesMUS81 protein, humanbreak-induced replicationcancerDNA repairDNA replicationgenomic instabilitymicrosatellite instabilitymutagenesismyotonic dystrophypolycystic kidney diseasetrinucleotide repeat disease

Identifiers

PMID32873711
PMCPMC7650239
OpenAlexW3082588834

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.