Evidence map›Paper›PMID 32872926›Full record

ArticleThe Review of scientific instruments2020

Calibration of T-shaped atomic force microscope cantilevers using the thermal noise method.

Youngkyu Kim, Nicola Mandriota, Davis Goodnight, Ozgur Sahin

Abstract read
In one paragraph

Article in The Review of scientific instruments, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

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0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

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5 · Who and what money

Authors and funding

4 authors.

Youngkyu KimDepartment of Biological Sciences, Columbia University, New York, New York 10027, USA.ORCID 0000000327222167
Nicola MandriotaDepartment of Biological Sciences, Columbia University, New York, New York 10027, USA.
Davis GoodnightDepartment of Biological Sciences, Columbia University, New York, New York 10027, USA.
Ozgur SahinDepartment of Biological Sciences, Columbia University, New York, New York 10027, USA.ORCID 0000000327662816

Funding

Novel sub-cellular chemical and mechanical nanoimagingDP2EB018657 · NIBIB · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI SAHIN, OZGUR · 2013 to 2013
$2.4M
Nanomechanical imaging of protein dynamics via programmable DNA interactionsR01GM130948 · NIGMS · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI SAHIN, OZGUR · 2019 to 2021
$960k
NIBIB NIH HHS DP2 EB018657NIGMS NIH HHS R01 GM130948
6 · The paper itself

Abstract

The tip-sample interaction force measurements in atomic force microscopy (AFM) provide information about materials' properties with nanoscale resolution. The T-shaped cantilevers used in Torsional-Harmonic AFM allow measuring the rapidly changing tip-sample interaction forces using the torsional (twisting) deflections of the cantilever due to the off-axis placement of the sharp tip. However, it has been difficult to calibrate these cantilevers using the commonly used thermal noise-based calibration method as the mechanical coupling between flexural and torsional deflections makes it challenging to determine the deflection sensitivities from force-distance curves. Here, we present thermal noise-based calibration of these T-shaped AFM cantilevers by simultaneously analyzing flexural and torsional thermal noise spectra, along with deflection signals during a force-distance curve measurement. The calibration steps remain identical to the conventional thermal noise method, but a computer performs additional calculations to account for mode coupling. We demonstrate the robustness of the calibration method by determining the sensitivity of calibration results to the laser spot position on the cantilever, to the orientation of the cantilever in the cantilever holder, and by repeated measurements. We validated the quantitative force measurements against the known unfolding force of a protein, the I91 domain of titin, which resulted in consistent unfolding force values among six independently calibrated cantilevers.

Identifiers

PMID32872926
PMCPMC7413748

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.