Evidence map›Paper›PMID 32871096›Full record

ArticleJournal of the Royal Society, Interface2020

A multivariate geostatistical framework for combining multiple indices of abundance for disease vectors and reservoirs: a case study of

Max T Eyre, Ticiana S A Carvalho-Pereira, Fábio N Souza, Hussein Khalil, Kathryn P Hacker, Soledad Serrano, Joshua P Taylor, Mitermayer G Reis, Albert I Ko, Mike Begon and 3 more

Open access · bronzeAbstract read
In one paragraph

Article in Journal of the Royal Society, Interface, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.0field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 12 citations in OpenAlex.

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  6. Effect of Sewerage on the Contamination of Soil with PathogenicEnvironmental science & technology · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 6 institutions in 4 countries.

Max T EyreCentre for Health Informatics, Computing, and Statistics, Lancaster University Medical School, Lancaster LA1 4YW, UK.
Ticiana S A Carvalho-PereiraInstitute of Collective Health, Federal University of Bahia, Salvador 40110-040, Bahia, Brazil.
Fábio N SouzaInstitute of Collective Health, Federal University of Bahia, Salvador 40110-040, Bahia, Brazil.
Hussein KhalilInstitute of Collective Health, Federal University of Bahia, Salvador 40110-040, Bahia, Brazil.
Kathryn P HackerUniversity of Pennsylvania, Philadelphia, PA 19104, USA.
Soledad SerranoInstituto de Investigaciones Forestales y Agropecuarias Bariloche (IFAB), Modesta Victoria 4450, 8400 San Carlos de Bariloche, Río Negro, Argentina.
Joshua P TaylorInstituto de Investigaciones Forestales y Agropecuarias Bariloche (IFAB), Modesta Victoria 4450, 8400 San Carlos de Bariloche, Río Negro, Argentina.
Mitermayer G ReisInstitute of Collective Health, Federal University of Bahia, Salvador 40110-040, Bahia, Brazil.
Albert I KoOswaldo Cruz Foundation, Brazilian Ministry of Health, Salvador 40296-710, Bahia, Brazil.
Mike BegonDepartment of Evolution, Ecology and Behaviour, University of Liverpool, Liverpool L69 7ZB, UK.
Peter J DiggleCentre for Health Informatics, Computing, and Statistics, Lancaster University Medical School, Lancaster LA1 4YW, UK.
Federico CostaInstitute of Collective Health, Federal University of Bahia, Salvador 40110-040, Bahia, Brazil.
Emanuele GiorgiCentre for Health Informatics, Computing, and Statistics, Lancaster University Medical School, Lancaster LA1 4YW, UK.
Universidade Federal da Bahia · BRLancaster University · GBLiverpool School of Tropical Medicine · GBUniversity of Liverpool · GBUniversity of Pennsylvania · USYale University · US

Funding

Yale Clinical and Translational Science Award (U Component)UL1TR001863 · NCATS · YALE UNIVERSITY · PI John H. Krystal, LUCILA OHNO-MACHADO · 2016 to 2026
$102.9M
Research Mentoring and Building Capacity of underrepresented Minority Research Scientists in India.D43TW010540 · FIC · YALE UNIVERSITY · PI MICHELE BARRY, Eva Harris · 2017 to 2026
$15.5M
Global Health Fellows and Scholars Research TrainingR25TW009338 · FIC · UNIVERSITY OF CALIFORNIA BERKELEY · PI BARRY, MICHELE, KO, ALBERT ICKSANG · 2012 to 2016
$5.2M
Disease Determinants of Urban LeptospirosisU01AI088752 · NIAID · YALE UNIVERSITY · PI KO, ALBERT ICKSANG · 2010 to 2014
$3.6M
Natural History of Urban LeptospirosisR01AI052473 · NIAID · YALE UNIVERSITY · PI KO, ALBERT ICKSANG · 2003 to 2013
$2.8M
Ecoepidemiology of leptospirosis in the urban slums of BrazilR01TW009504 · FIC · YALE UNIVERSITY · PI BEGON, MICHAEL, CHILDS, JAMES EMORY · 2012 to 2016
$2.2M
Rodent Population Dynamics and Leptospirosis Infection in Urban Slum EnviornmentsF31AI114245 · NIAID · YALE UNIVERSITY · PI HACKER, KATHRYN PATRICIA · 2014 to 2015
$55k
FIC NIH HHS D43 TW010540FIC NIH HHS R01 TW009504FIC NIH HHS R25 TW009338Medical Research Council 1964635Medical Research Council MR/P024084/1Medical Research Council MR/T029781/1NCATS NIH HHS UL1 TR001863NIAID NIH HHS F31 AI114245NIAID NIH HHS R01 AI052473NIAID NIH HHS U01 AI088752Wellcome TrustWellcome Trust 102330/Z/13/ZWellcome Trust 218987/Z/19/Z
6 · The paper itself

Abstract

A key requirement in studies of endemic vector-borne or zoonotic disease is an estimate of the spatial variation in vector or reservoir host abundance. For many vector species, multiple indices of abundance are available, but current approaches to choosing between or combining these indices do not fully exploit the potential inferential benefits that might accrue from modelling their joint spatial distribution. Here, we develop a class of multivariate generalized linear geostatistical models for multiple indices of abundance. We illustrate this novel methodology with a case study on Norway rats in a low-income urban Brazilian community, where rat abundance is a likely risk factor for human leptospirosis. We combine three indices of rat abundance to draw predictive inferences on a spatially continuous latent process,

Indexed as

Insect VectorsZoonosesAnimalsBrazilDisease ReservoirsRatsabundance indicesepidemiologyleptospirosismultivariate model-based geostatisticsNorway ratzoonotic and vector-borne diseases

Identifiers

PMID32871096
PMCPMC7536052
OpenAlexW3082930321

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.