Evidence map›Paper›PMID 32871004›Full record

ArticleBioinformatics (Oxford, England)2021

CaNDis: a web server for investigation of causal relationships between diseases, drugs and drug targets.

Blaž Škrlj, Nika Eržen, Nada Lavrač, Tanja Kunej, Janez Konc

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In one paragraph

Article in Bioinformatics (Oxford, England), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Blaž ŠkrljDepartment of Knowledge Technologies, Jožef Stefan Institute, Slovenia.
Nika ErženDepartment of Knowledge Technologies, Jožef Stefan Institute, Slovenia.
Nada LavračDepartment of Knowledge Technologies, Jožef Stefan Institute, Slovenia.
Tanja KunejDepartment of Animal Science, Biotechnical Faculty, University of Ljubljana, Slovenia.ORCID 0000-0002-0465-1762
Janez KoncTheory Department, National Institute of Chemistry, SI-1000 Ljubljana, Slovenia.ORCID 0000-0003-0160-3375

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

motivationCausal biological interaction networks represent cellular regulatory pathways. Their fusion with other biological data enables insights into disease mechanisms and novel opportunities for drug discovery.

resultsWe developed Causal Network of Diseases (CaNDis), a web server for the exploration of a human causal interaction network, which we expanded with data on diseases and FDA-approved drugs, on the basis of which we constructed a disease-disease network in which the links represent the similarity between diseases. We show how CaNDis can be used to identify candidate genes with known and novel roles in disease co-occurrence and drug-drug interactions. AVAILABILITYAND IMPLEMENTATION: CaNDis is freely available to academic users at http://candis.ijs.si and http://candis.insilab.org. SUPPLEMENTARY INFORMATION: Supplementary data are available at Bioinformatics online.

Indexed as

Pharmaceutical PreparationsSoftwareComputational BiologyComputersHumansInternetPharmaceutical Preparations

Identifiers

PMID32871004
PMCPMC8098028

What OpenQuestion holds

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LicenceCC BY
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.