Evidence map›Paper›PMID 32869739›Full record

ArticleeLife2020

Intra-species differences in population size shape life history and genome evolution.

David Willemsen, Rongfeng Cui, Martin Reichard, Dario Riccardo Valenzano

Open access · goldAbstract read
In one paragraph

Article in eLife, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
9.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 54 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. The Evolutionary Interplay of Somatic and Germline Mutation Rates.Annual review of biomedical data science · 2024
    Review
  8. Immune aging in annual killifish.Immunity & ageing : I & A · 2024
    Review
  9. Article
  10. Article
  11. Fast satellite DNA evolution in Nothobranchius annual killifishes.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2023
    Article
  12. The evolution of aging and lifespan.Trends in genetics : TIG · 2023
    Review
  13. Article
  14. Differential Expression Analysis ofCold Spring Harbor protocols · 2023
    Article
  15. Article
  16. Article
  17. Review
  18. Aging: All roads lead to mitochondria.Seminars in cell & developmental biology · 2021
    Article
  19. Eusociality in snapping shrimps is associated with larger genomes and an accumulation of transposable elements.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  20. Alternative Animal Models of Aging Research.Frontiers in molecular biosciences · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 2 countries.

David WillemsenMax Planck Institute for Biology of Ageing, Cologne, Germany.
Rongfeng CuiMax Planck Institute for Biology of Ageing, Cologne, Germany.ORCID http://orcid.org/0000-0002-8146-6958
Martin ReichardCzech Academy of Sciences, Institute of Vertebrate Biology, Brno, Czech Republic.ORCID http://orcid.org/0000-0002-9306-0074
Dario Riccardo ValenzanoMax Planck Institute for Biology of Ageing, Cologne, Germany.ORCID https://orcid.org/0000-0002-8761-8289
Max Planck Institute for Biology of Ageing · DEMasaryk University · CZUniversity of Cologne · DE

Funding

Czech Science Foundation 19-01789SMax Planck Society Valenzano Group core funding
6 · The paper itself

Abstract

The evolutionary forces shaping life history divergence within species are largely unknown. Turquoise killifish display differences in lifespan among wild populations, representing an ideal natural experiment in evolution and diversification of life history. By combining genome sequencing and population genetics, we investigate the evolutionary forces shaping lifespan among wild turquoise killifish populations. We generate an improved reference genome assembly and identify genes under positive and purifying selection, as well as those evolving neutrally. Short-lived populations from the outer margin of the species range have small population size and accumulate deleterious mutations in genes significantly enriched in the WNT signaling pathway, neurodegeneration, cancer and the mTOR pathway. We propose that limited population size due to habitat fragmentation and repeated population bottlenecks, by increasing the genome-wide mutation load, exacerbates the effects of mutation accumulation and cumulatively contribute to the short adult lifespan.

Indexed as

Evolution, MolecularMutation AccumulationPopulation DensityAgingAnimalsBiological EvolutionEcosystemFundulidaeGenomeLongevityModels, Animalagingevolutionevolutionary biologygeneticsgenomicslifespannothobranchius furzeriturquoise killifish

Identifiers

PMID32869739
PMCPMC7462614
OpenAlexW3082590658

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.