Evidence map›Paper›PMID 32868907›Full record

ArticleNature genetics2020

Chromatin binding of FOXA1 is promoted by LSD1-mediated demethylation in prostate cancer.

Shuai Gao, Sujun Chen, Dong Han, Zifeng Wang, Muqing Li, Wanting Han, Anna Besschetnova, Mingyu Liu, Feng Zhou, David Barrett and 12 more

Open access · greenAbstract read
In one paragraph

Article in Nature genetics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 87 papers.

0numbers the graph read from it
0cells of the map it votes in
87citing papers in PubMed
9.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

87 citing papers in PubMed, 120 citations in OpenAlex.

  1. Trial
  2. Review
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Review
  18. Article
  19. Review
  20. Review

27 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

22 authors at 4 institutions in 3 countries.

Shuai Gao *Center for Personalized Cancer Therapy, University of Massachusetts Boston, Boston, MA, USA.ORCID http://orcid.org/0000-0002-7304-8801
Sujun Chen *Department of Medical Biophysics, University of Toronto, Toronto, Ontario, Canada.
Dong HanCenter for Personalized Cancer Therapy, University of Massachusetts Boston, Boston, MA, USA.
Zifeng WangCenter for Personalized Cancer Therapy, University of Massachusetts Boston, Boston, MA, USA.
Muqing LiCenter for Personalized Cancer Therapy, University of Massachusetts Boston, Boston, MA, USA.
Wanting HanCenter for Personalized Cancer Therapy, University of Massachusetts Boston, Boston, MA, USA.ORCID http://orcid.org/0000-0002-2173-3647
Anna BesschetnovaCenter for Personalized Cancer Therapy, University of Massachusetts Boston, Boston, MA, USA.
Mingyu LiuCenter for Personalized Cancer Therapy, University of Massachusetts Boston, Boston, MA, USA.
Feng ZhouCenter for Personalized Cancer Therapy, University of Massachusetts Boston, Boston, MA, USA.
David BarrettCenter for Personalized Cancer Therapy, University of Massachusetts Boston, Boston, MA, USA.
My Phu LuongCenter for Personalized Cancer Therapy, University of Massachusetts Boston, Boston, MA, USA.
Jude OwireduCenter for Personalized Cancer Therapy, University of Massachusetts Boston, Boston, MA, USA.
Yi LiangPrincess Margaret Cancer Center/University Health Network, Toronto, Ontario, Canada.
Musaddeque AhmedPrincess Margaret Cancer Center/University Health Network, Toronto, Ontario, Canada.
Jessica PetriccaDepartment of Medical Biophysics, University of Toronto, Toronto, Ontario, Canada.
Susan PatalanoCenter for Personalized Cancer Therapy, University of Massachusetts Boston, Boston, MA, USA.
Jill A MacoskaCenter for Personalized Cancer Therapy, University of Massachusetts Boston, Boston, MA, USA.
Eva CoreyDepartment of Urology, University of Washington, Seattle, WA, USA.ORCID http://orcid.org/0000-0002-9244-3807
Sen ChenHematology-Oncology Division, Department of Medicine, Beth Israel Deaconess Medical Center and Harvard Medical School, Boston, MA, USA.
Steven P BalkHematology-Oncology Division, Department of Medicine, Beth Israel Deaconess Medical Center and Harvard Medical School, Boston, MA, USA. sbalk@bidmc.harvard.edu.ORCID http://orcid.org/0000-0002-4546-7371
Housheng Hansen HeDepartment of Medical Biophysics, University of Toronto, Toronto, Ontario, Canada. hansenhe@uhnresearch.ca.ORCID http://orcid.org/0000-0003-2898-3363
Changmeng CaiCenter for Personalized Cancer Therapy, University of Massachusetts Boston, Boston, MA, USA. changmeng.cai@umb.edu.ORCID http://orcid.org/0000-0002-8701-2586
University of Massachusetts Boston · USBeth Israel Deaconess Medical Center · USUniversity Health Network · CAUniversity of Washington · US

Funding

U Mass Boston / DFHCC U54 Partnership (1 of 2)U54CA156732 · NCI · DANA-FARBER CANCER INST · PI WENDY Beth LONDON · 2010 to 2026
$25.6M
Steroid Metabolism in Castration-Resistant Prostate CancerP01CA163227 · NCI · BETH ISRAEL DEACONESS MEDICAL CENTER · PI Steven P. Balk · 2013 to 2026
$25.0M
UMass Boston-DF/HCC U54 Partnership (2 of 2)U54CA156734 · NCI · UNIVERSITY OF MASSACHUSETTS BOSTON · PI ADAN COLON-CARMONA, Jill A. Macoska · 2010 to 2026
$24.9M
Role of Beta-Catenin in Urinary DysfunctionU54DK104310 · NIDDK · UNIVERSITY OF WISCONSIN-MADISON · PI MACOSKA, JILL A., MARKER, PAUL C · 2014 to 2023
$12.8M
Initiative for Maximizing Student Diversity at UMass BostonR25GM076321 · NIGMS · UNIVERSITY OF MASSACHUSETTS BOSTON · PI COLON-CARMONA, ADAN, SKVIRSKY, RACHEL · 2008 to 2022
$4.5M
Study the Mechanism of Retinoblastoma Protein Mediated Androgen Receptor Transcriptional Repression Activity on DNA ReplicationR01CA211350 · NCI · UNIVERSITY OF MASSACHUSETTS BOSTON · PI CAI, CHANGMENG · 2017 to 2021
$1.7M
Molecular basis of androgen receptor mediated gene transcriptional repressionR00CA166507 · NCI · UNIVERSITY OF MASSACHUSETTS BOSTON · PI CAI, CHANGMENG · 2015 to 2017
$726k
CIHR 142246CIHR 152863CIHR 152864CIHR 159567NCI NIH HHS P01 CA163227NCI NIH HHS R00 CA166507NCI NIH HHS R01 CA211350NCI NIH HHS U54 CA156732NCI NIH HHS U54 CA156734NIDDK NIH HHS U54 DK104310NIGMS NIH HHS R25 GM076321
6 · The paper itself

Abstract

FOXA1 functions as a pioneer transcription factor by facilitating the access to chromatin for steroid hormone receptors, such as androgen receptor and estrogen receptor

Indexed as

Androgen Receptor AntagonistsAnimalsCell Line, TumorChromatinDNA-Binding ProteinsDNA MethylationGene Expression Regulation, NeoplasticGene Knockout TechniquesGonadal Steroid HormonesHepatocyte Nuclear Factor 3-alphaHeterograftsHistone DemethylasesHumansMaleMiceProstateAndrogen Receptor AntagonistsChromatinDNA-Binding ProteinsFOXA1 protein, humanGonadal Steroid HormonesHepatocyte Nuclear Factor 3-alphaHistone DemethylasesKDM1A protein, humanReceptors, Androgen

Identifiers

PMID32868907
PMCPMC7541538
OpenAlexW3082264507

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.