Evidence map›Paper›PMID 32868811›Full record

ArticleScientific reports2020

Growth retardation-responsive analysis of mRNAs and long noncoding RNAs in the liver tissue of Leiqiong cattle.

Lingxuan Kong, Guangbin Liu, Ming Deng, Zhiquan Lian, Yinru Han, Baoli Sun, Yongqing Guo, Dewu Liu, Yaokun Li

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.3field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 10 citations in OpenAlex.

  1. Review
  2. UnravelingFrontiers in oncology · 2024
    Review
  3. Article
  4. LncRNAs in domesticated animals: from dog to livestock species.Mammalian genome : official journal of the International Mammalian Genome Society · 2022
    Review
  5. Article
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Lingxuan Kong *College of Animal Science, South China Agricultural University, Guangzhou, 510642, GD, China.
Guangbin Liu *College of Animal Science, South China Agricultural University, Guangzhou, 510642, GD, China.
Ming DengCollege of Animal Science, South China Agricultural University, Guangzhou, 510642, GD, China.
Zhiquan LianCollege of Animal Science, South China Agricultural University, Guangzhou, 510642, GD, China.
Yinru HanCollege of Animal Science, South China Agricultural University, Guangzhou, 510642, GD, China.
Baoli SunCollege of Animal Science, South China Agricultural University, Guangzhou, 510642, GD, China.
Yongqing GuoCollege of Animal Science, South China Agricultural University, Guangzhou, 510642, GD, China.
Dewu LiuCollege of Animal Science, South China Agricultural University, Guangzhou, 510642, GD, China. dwliu@scau.edu.cn.
Yaokun LiCollege of Animal Science, South China Agricultural University, Guangzhou, 510642, GD, China. liyaokun1986@163.com.
South China Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

As an important type of non-coding RNA molecule, long non-coding RNAs (lncRNAs) have varied roles in many biological processes, and have been studied extensively over the past few years. However, little is known about lncRNA-mediated regulation during cattle growth and development. Therefore, in the present study, RNA sequencing was used to determine the expression level of mRNAs and lncRNAs in the liver of adult Leiqiong cattle under the condition of growth retardation and normal growth. We totally detected 1,124 and 24 differentially expressed mRNAs and lncRNAs, respectively. The differentially expressed mRNAs were mainly associated with growth factor binding, protein K63-linked ubiquitination and cellular protein metabolic process; additionally, they were significantly enriched in the growth and development related pathways, including PPAR signaling pathway, vitamin B6 metabolism, glyoxylate and dicarboxylate metabolism. Combined analysis showed that the co-located differentially expressed lncRNA Lnc_002583 might positively influence the expression of the corresponding genes IFI44 and IFI44L, exerting co-regulative effects on Leiqiong cattle growth and development. Thus, we made the hypothesis that Lnc_002583, IFI44 and IFI44L might function synergistically to regulate the growth of Leiqiong cattle. This study provides a catalog of Leiqiong cattle liver mRNAs and lncRNAs, and will contribute to a better understanding of the molecular mechanism underlying growth regulataion.

Indexed as

AnimalsCattleCattle DiseasesGene Expression Regulation, DevelopmentalGrowth DisordersLiverReal-Time Polymerase Chain ReactionRNA, Long NoncodingRNA, MessengerSequence Analysis, RNATranscriptomeRNA, Long NoncodingRNA, Messenger

Identifiers

PMID32868811
PMCPMC7459292
OpenAlexW3081580243

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.