Evidence map›Paper›PMID 32867782›Full record

ArticleJournal of translational medicine2020

Genomic landscape of the immune microenvironments of brain metastases in breast cancer.

Wei-Cheng Lu, Hui Xie, Ce Yuan, Jin-Jiang Li, Zhao-Yang Li, An-Hua Wu

Open access · goldAbstract read
In one paragraph

Article in Journal of translational medicine, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.6field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 25 citations in OpenAlex.

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  7. The Tumor Immune Microenvironment in Breast Cancer Progression.Acta oncologica (Stockholm, Sweden) · 2024
    Review
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  16. Identification of Key Genes Associated with Brain Metastasis from Breast Cancer: A Bioinformatics Analysis.Medical science monitor : international medical journal of experimental and clinical research · 2022
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 5 institutions in 2 countries.

Wei-Cheng LuDepartment of Neurosurgery, First Affiliated Hospital of China Medical University, Shenyang, Liaoning, China.
Hui XieDepartment of Histology and Embryology, College of Basic Medicine, Shenyang Medical College, Shenyang, Liaoning, China.
Ce YuanGraduate Program in Bioinformatics and Computational Biology, University of Minnesota, Minneapolis, USA.
Jin-Jiang LiDepartment of Neurosurgery, General Hospital of Northern Theater Command, Shenyang, Liaoning, China.
Zhao-Yang LiDepartment of Laboratory Animal Center, China Medical University, Shenyang, Liaoning, China.
An-Hua WuDepartment of Neurosurgery, First Affiliated Hospital of China Medical University, Shenyang, Liaoning, China. wuanhua@yahoo.com.ORCID 0000-0002-3402-1884
First Hospital of China Medical University · CNChina Medical University · CNGeneral Hospital of Shenyang Military Region · CNShenyang Medical College · CNUniversity of Minnesota · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThis study was intended to investigate the genomic landscape of the immune microenvironments of brain metastases in breast cancer.

methodsThree gene expression profile datasets (GSE76714, GSE125989 and GSE43837) of breast cancer with brain metastases were downloaded from Gene Expression Omnibus (GEO) database. After differential expression analysis, the tumor immune microenvironment and immune cell infiltration were analyzed. Then immune-related genes were identified, followed by function analysis, transcription factor (TF)-miRNA-mRNA co-regulatory network analysis, and survival analysis of metastatic recurrence.

resultsThe present results showed that the tumor immune microenvironment in brain metastases was immunosuppressed compared with primary caner. Compared with primary cancer samples, the infiltration ratio of plasma cells in brain metastases samples was significantly higher, while the infiltration ratio of macrophages M2 cells in brain metastases samples was significantly lower. Total 42 immune-related genes were identified, such as THY1 and NEU2. CD1B, THY1 and DOCK2 were found to be implicated in the metastatic recurrence of breast cancer.

conclusionsTargeting macrophages or plasma cells may be new strategies for immunotherapy of breast cancer with brain metastases. THY1 and NEU2 may be potential therapeutic targets for breast cancer with brain metastases, and THY1, CD1B and DOCK2 may serve as potential prognostic markers for improvement of brain metastases survival.

Indexed as

Brain NeoplasmsBreast NeoplasmsBreastGenomicsHumansTumor MicroenvironmentBrain metastasesBreast cancerGeneImmune

Identifiers

PMID32867782
PMCPMC7461335
OpenAlexW3081659024

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.