Evidence map›Paper›PMID 32867711›Full record

ArticleBMC cancer2020

UBR-box containing protein, UBR5, is over-expressed in human lung adenocarcinoma and is a potential therapeutic target.

Kumar Saurabh, Parag P Shah, Mark A Doll, Leah J Siskind, Levi J Beverly

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in BMC cancer, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.7field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 14 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Kumar SaurabhJames Graham Brown Cancer Center, School of Medicine, University of Louisville, Louisville, KY, USA.
Parag P ShahJames Graham Brown Cancer Center, School of Medicine, University of Louisville, Louisville, KY, USA.
Mark A DollJames Graham Brown Cancer Center, School of Medicine, University of Louisville, Louisville, KY, USA.
Leah J SiskindJames Graham Brown Cancer Center, School of Medicine, University of Louisville, Louisville, KY, USA.
Levi J BeverlyJames Graham Brown Cancer Center, School of Medicine, University of Louisville, Louisville, KY, USA. levi.beverly@louisville.edu.
University of Louisville · US

Funding

The role of neutral ceramidase in acute kidney injury and its progression to chronic kidney disease.R01DK124112 · NIDDK · UNIVERSITY OF LOUISVILLE · PI SISKIND, LEAH J · 2020 to 2023
$2.1M
National Institutes of Health (US) ca193220NIDDK NIH HHS R01 DK124112
6 · The paper itself

Abstract

backgroundN-end rule ubiquitination pathway is known to be disrupted in many diseases, including cancer. UBR5, an E3 ubiquitin ligase, is mutated and/or overexpressed in human lung cancer cells suggesting its pathological role in cancer.

methodsWe determined expression of UBR5 protein in multiple lung cancer cell lines and human patient samples. Using immunoprecipitation followed by mass spectrometry we determined the UBR5 interacting proteins. The impact of loss of UBR5 for lung adenocarcinoma cell lines was analyzed using cell viability, clonogenic assays and in vivo xenograft models in nude mice. Additional Western blot analysis was performed to assess the loss of UBR5 on downstream signaling. Statistical analysis was done by one-way ANOVA for in vitro studies and Wilcoxon paired t-test for in vivo tumor volumes.

resultsWe show variability of UBR5 expression levels in lung adenocarcinoma cell lines and in primary human patient samples. To gain better insight into the role that UBR5 may play in lung cancer progression we performed unbiased interactome analyses for UBR5. Data indicate that UBR5 has a wide range of interacting protein partners that are known to be involved in critical cellular processes such as DNA damage, proliferation and cell cycle regulation. We have demonstrated that shRNA-mediated loss of UBR5 decreases cell viability and clonogenic potential of lung adenocarcinoma cell lines. In addition, we found decreased levels of activated AKT signaling after the loss of UBR5 in lung adenocarcinoma cell lines using multiple means of UBR5 knockdown/knockout. Furthermore, we demonstrated that loss of UBR5 in lung adenocarcinoma cells results in significant reduction of tumor volume in nude mice.

conclusionsThese findings demonstrate that deregulation of the N-end rule ubiquitination pathway plays a crucial role in the etiology of some human cancers, and blocking this pathway via UBR5-specific inhibitors, may represent a unique therapeutic target for human cancers.

Indexed as

A549 CellsAdenocarcinoma of LungAnimalsAntineoplastic AgentsCell SurvivalGene Knockdown TechniquesGene Knockout TechniquesHumansLung NeoplasmsMiceMice, KnockoutMice, NudeMolecular Targeted TherapyProto-Oncogene Proteins c-aktRNA, Small InterferingSignal TransductionAntineoplastic AgentsProto-Oncogene Proteins c-aktRNA, Small InterferingUbiquitin-Protein LigasesUBR5 protein, humanAKTInteractionLung adenocarcinomaN-end rule ubiquitinationUBR5

Identifiers

PMID32867711
PMCPMC7457484
OpenAlexW3081555592

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.