Evidence map›Paper›PMID 32867704›Full record

ArticleBMC ophthalmology2020

Comparative analysis of the tear protein profile in herpes simplex virus type 1 epithelial keratitis.

Hua Yang, Xiaozhao Yang, Yani Wang, Xuan Zheng, Yi Zhang, Yan Shao

Open access · goldAbstract read
In one paragraph

Article in BMC ophthalmology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.0field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 17 citations in OpenAlex.

  1. Review
  2. Applications of artificial intelligence and bioinformatics methodologies in the analysis of ocular biofluid markers: a scoping review.Graefe's archive for clinical and experimental ophthalmology = Albrecht von Graefes Archiv fur klinische und experimentelle Ophthalmologie · 2024
    Article
  3. Review
  4. Viral MicroRNAs in Herpes Simplex Virus 1 Pathobiology.Current pharmaceutical design · 2024
    Review
  5. Article
  6. Article
  7. Article
  8. Ocular Surface Infection Mediated Molecular Stress Responses: A Review.International journal of molecular sciences · 2022
    Review
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Hua YangDepartment of Ophthalmology, Xi'an No.1 Hospital, Xi'an, 710002, Shaanxi Province, China.
Xiaozhao YangDepartment of Ophthalmology, Xi'an No.1 Hospital, Xi'an, 710002, Shaanxi Province, China. xiaozhao_sx@126.com.
Yani WangDepartment of Ophthalmology, Xi'an No.1 Hospital, Xi'an, 710002, Shaanxi Province, China.
Xuan ZhengDepartment of Ophthalmology, Xi'an No.1 Hospital, Xi'an, 710002, Shaanxi Province, China.
Yi ZhangDepartment of Ophthalmology, Xi'an No.1 Hospital, Xi'an, 710002, Shaanxi Province, China.
Yan ShaoDepartment of Ophthalmology, Xi'an No.1 Hospital, Xi'an, 710002, Shaanxi Province, China.
Wuhan No.1 Hospital · CN

Funding

Xi'an Science and Technology Project 2017116SF/YX010(5)
6 · The paper itself

Abstract

backgroundHerpes simplex virus type 1 (HSV-1) keratitis is a major cause of corneal blindness in the world, and an in-depth understanding of its pathogenesis may help improve existing diagnosis and treatment. The purpose of this study is to compare and analysis the total tear protein profile of HSV-1 epithelial keratitis patients, and to quantify the potential candidate biomarkers of HSV-1 epithelial keratitis.

methodsWe investigated the proteome in tear fluid from three HSV-1 epithelial keratitis patients and three healthy control subjects using nano-scale liquid chromatography-tandem mass spectrometry (nLC-MS/MS) analysis. Functional annotation of differentially expressed proteins was done with the Gene Ontology (GO) analysis. ELISA was done to quantify the potential candidate biomarkers in 26 clinical cases.

resultsTear fluid from three HSV-1 epithelial keratitis patients and three healthy control subjects contained a total of 1275 proteins and 326 proteins were unique to tear fluid of HSV-1 epithelial keratitis patients. Bioinformatics analysis revealed that tear proteins from HSV-1 epithelial keratitis patients may be involved in metabolic processes, antigen presentation, inflammatory response, and in the TNF-mediated and T cell receptor pathways. Furthermore, IL1A, IL12B, DEFB4A, and CAMP, which are associated with the inflammatory response and inhibition of viral infection, were significantly more abundant in the HSV-1 epithelial keratitis patients than in the healthy control subjects.

conclusionsThis study reports the proteomic profile of tears in HSV-1 epithelial keratitis for the first time and identifies a number of unique differentially expressed proteins.

Indexed as

Herpesvirus 1, HumanKeratitis, HerpeticDNA, ViralEye ProteinsHumansProteomicsTandem Mass SpectrometryDNA, ViralEye Proteinstear proteinsBioinformationELISAHSV-1 epithelial keratitisMass spectrometryProteomeTears

Identifiers

PMID32867704
PMCPMC7461310
OpenAlexW3082587565

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.