Evidence map›Paper›PMID 32866618›Full record

ArticleCellular and molecular gastroenterology and hepatology2021

The Genetic Architecture of Carbon Tetrachloride-Induced Liver Fibrosis in Mice.

Iina Tuominen, Brie K Fuqua, Calvin Pan, Nicole Renaud, Kevin Wroblewski, Mete Civelek, Kara Clerkin, Ashot Asaryan, Sara G Haroutunian, Joseph Loureiro and 13 more

Open access · goldAbstract read
In one paragraph

Article in Cellular and molecular gastroenterology and hepatology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
2.6field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 29 citations in OpenAlex.

  1. Actin cytoskeletal dynamics in hepatic myofibroblasts and fibrosis.Nature reviews. Gastroenterology & hepatology · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors at 3 institutions in 2 countries.

Iina TuominenDepartment of Medicine, Vatche and Tamar Manoukian Division of Digestive Diseases at UCLA and Pfleger Liver Institute, David Geffen School of Medicine at UCLA, Los Angeles, California.
Brie K FuquaDepartments of Medicine, Microbiology and Human Genetics, David Geffen School of Medicine at UCLA, Los Angeles, California.
Calvin PanDepartments of Medicine, Microbiology and Human Genetics, David Geffen School of Medicine at UCLA, Los Angeles, California.
Nicole RenaudNovartis Institutes for Biomedical Research, Cambridge, Massachusetts.
Kevin WroblewskiDepartment of Medicine, Vatche and Tamar Manoukian Division of Digestive Diseases at UCLA and Pfleger Liver Institute, David Geffen School of Medicine at UCLA, Los Angeles, California.
Mete CivelekDepartments of Medicine, Microbiology and Human Genetics, David Geffen School of Medicine at UCLA, Los Angeles, California.
Kara ClerkinDepartment of Medicine, Vatche and Tamar Manoukian Division of Digestive Diseases at UCLA and Pfleger Liver Institute, David Geffen School of Medicine at UCLA, Los Angeles, California.
Ashot AsaryanDepartment of Medicine, Vatche and Tamar Manoukian Division of Digestive Diseases at UCLA and Pfleger Liver Institute, David Geffen School of Medicine at UCLA, Los Angeles, California.
Sara G HaroutunianDepartment of Medicine, Vatche and Tamar Manoukian Division of Digestive Diseases at UCLA and Pfleger Liver Institute, David Geffen School of Medicine at UCLA, Los Angeles, California.
Joseph LoureiroNovartis Institutes for Biomedical Research, Cambridge, Massachusetts.
Jason BorawskiNovartis Institutes for Biomedical Research, Cambridge, Massachusetts.
Guglielmo RomaNovartis Pharma AG, Basel, Switzerland.
Judith KnehrNovartis Pharma AG, Basel, Switzerland.
Walter CarboneNovartis Pharma AG, Basel, Switzerland.
Samuel FrenchDepartment of Pathology and Laboratory Medicine, David Geffen School of Medicine at UCLA, Los Angeles, California.
Brian W ParksDepartments of Medicine, Microbiology and Human Genetics, David Geffen School of Medicine at UCLA, Los Angeles, California.
Simon T HuiDepartments of Medicine, Microbiology and Human Genetics, David Geffen School of Medicine at UCLA, Los Angeles, California.
Margarete MehrabianDepartments of Medicine, Microbiology and Human Genetics, David Geffen School of Medicine at UCLA, Los Angeles, California.
Clara MagyarDepartment of Pathology and Laboratory Medicine, David Geffen School of Medicine at UCLA, Los Angeles, California.
Rita M CantorDepartment of Human Genetics, David Geffen School of Medicine at UCLA, Los Angeles, California.
Chinweike UkomaduNovartis Institutes for Biomedical Research, Cambridge, Massachusetts.
Aldons J LusisDepartments of Medicine, Microbiology and Human Genetics, David Geffen School of Medicine at UCLA, Los Angeles, California. Electronic address: jlusis@mednet.ucla.edu.
Simon W BeavenDepartment of Medicine, Vatche and Tamar Manoukian Division of Digestive Diseases at UCLA and Pfleger Liver Institute, David Geffen School of Medicine at UCLA, Los Angeles, California. Electronic address: sbeaven@mednet.ucla.edu.
University of California, Los Angeles · USBoston Biomedical Research Institute · USNovartis (Switzerland) · CH

Funding

Women's CancersP30CA016042 · NCI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI Samuel Wheeler French · 1985 to 2026
$134.5M
Systems genomics of metabolic syndrome traitsP01HL028481 · NHLBI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI LUSIS, ALDONS JAKE · 1985 to 2019
$50.2M
Vascular Biology Training GrantT32HL069766 · NHLBI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI LUSIS, ALDONS JAKE · 2002 to 2022
$7.4M
Systems Genetics Dissection of Non-alcoholic SteatohepatitisR01DK117850 · NIDDK · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI Aldons Jake Lusis · 2019 to 2026
$4.6M
Gut microbiota and metabolite interactions in atherosclerosisR01HL144651 · NHLBI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI LUSIS, ALDONS JAKE, REY, FEDERICO E · 2019 to 2022
$2.6M
The Role of Liver X Receptors (LXRs) in the Pathogenesis of Hepatic FibrosisK08DK088998 · NIDDK · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI BEAVEN, SIMON WILLIAM · 2010 to 2014
$720k
Systems genetics analysis of cardiometabolic trait loci in humans K99HL121172 · NHLBI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI CIVELEK, METE · 2014 to 2015
$247k
NCI NIH HHS P30 CA016042NHLBI NIH HHS K99 HL121172NHLBI NIH HHS P01 HL028481NHLBI NIH HHS R01 HL144651NHLBI NIH HHS T32 HL069766NIDDK NIH HHS K08 DK088998NIDDK NIH HHS R01 DK117850
6 · The paper itself

Abstract

BACKGROUND &

aimsLiver fibrosis is a multifactorial trait that develops in response to chronic liver injury. Our aim was to characterize the genetic architecture of carbon tetrachloride (CCl

methodsChronic liver injury was induced by CCl

resultsWe discovered broad variation in fibrosis among the Hybrid Mouse Diversity Panel strains, demonstrating a significant genetic influence. Genome-wide association analyses revealed significant and suggestive loci underlying susceptibility to fibrosis, some of which overlapped with loci identified in mouse crosses and human population studies. Liver global gene expression was assessed by RNA sequencing across the strains, and candidate genes were identified using differential expression and expression quantitative trait locus analyses. Gene set enrichment analyses identified the underlying pathways, of which stellate cell involvement was prominent, and coexpression network modeling identified modules associated with fibrosis.

conclusionsOur results provide a rich resource for the design of experiments to understand mechanisms underlying fibrosis and for rational strain selection when testing antifibrotic drugs.

Indexed as

Genetic Predisposition to DiseaseAnimalsCarbon TetrachlorideDisease Models, AnimalGene Regulatory NetworksGenome-Wide Association StudyHumansInjections, IntraperitonealLiverLiver CirrhosisMaleMiceQuantitative Trait LociCarbon TetrachlorideCCl(4)Genome-Wide Association StudyLiver Toxicity and InjurySystems Genetics

Identifiers

PMID32866618
PMCPMC7674618
OpenAlexW3081872574

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.