Evidence map›Paper›PMID 32866376›Full record

ArticleJournal of the American Chemical Society2020

Evidence for Many Unique Solution Structures for Chymotrypsin Inhibitor 2: A Thermodynamic Perspective Derived from vT-ESI-IMS-MS Measurements.

Shannon A Raab, Tarick J El-Baba, Daniel W Woodall, Wen Liu, Yang Liu, Zane Baird, David A Hales, Arthur Laganowsky, David H Russell, David E Clemmer

Abstract read
In one paragraph

Article in Journal of the American Chemical Society, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Structure and Stabilities of Solution and Gas Phase Protein Complexes.Journal of the American Society for Mass Spectrometry · 2024
    Article
  6. Bortezomib Inhibits Open Configurations of the 20S Proteasome.Journal of the American Society for Mass Spectrometry · 2024
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Resolving Hidden Solution Conformations of Hemoglobin Using IMS-IMS on a Cyclic Instrument.Journal of the American Society for Mass Spectrometry · 2023
    Article
  12. Stability of 20S Proteasome Configurations: Preopening the Axial Gate.The journal of physical chemistry letters · 2023
    Article
  13. Article
  14. Review
  15. Review
  16. Temperature Regulates Stability, Ligand Binding (MgJournal of the American Chemical Society · 2022
    Article
  17. Temperature-Controlled Electrospray Ionization: Recent Progress and Applications.Chemistry (Weinheim an der Bergstrasse, Germany) · 2021
    Review
  18. Diketopiperazine Formation from FPGThe journal of physical chemistry. B · 2021
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Shannon A RaabDepartment of Chemistry, Indiana University, 800 Kirkwood Avenue, Bloomington, Indiana 47401, United States.
Tarick J El-BabaDepartment of Chemistry, Indiana University, 800 Kirkwood Avenue, Bloomington, Indiana 47401, United States.
Daniel W WoodallDepartment of Chemistry, Indiana University, 800 Kirkwood Avenue, Bloomington, Indiana 47401, United States.
Wen LiuDepartment of Chemistry, Texas A&M University, College Station, Texas 77843, United States.ORCID 0000-0002-4804-2918
Yang LiuDepartment of Chemistry, Texas A&M University, College Station, Texas 77843, United States.
Zane BairdBaxter Healthcare Corporation, 927 South Curry Pike, Bloomington, Indiana 47403, United States.
David A HalesDepartment of Chemistry, Hendrix College, Conway, Arkansas 72032, United States.
Arthur LaganowskyDepartment of Chemistry, Texas A&M University, College Station, Texas 77843, United States.ORCID 0000-0001-5012-5547
David H RussellDepartment of Chemistry, Texas A&M University, College Station, Texas 77843, United States.ORCID 0000-0003-0830-3914
David E ClemmerDepartment of Chemistry, Indiana University, 800 Kirkwood Avenue, Bloomington, Indiana 47401, United States.ORCID 0000-0003-4039-1360

Funding

Waters Select Series Cyclic IMS for P41 Native MS Resource Application to Alzheimer's DiseaseP41GM128577 · NIGMS · OHIO STATE UNIVERSITY · PI HARVEY, SOPHIE · 2018 to 2022
$7.6M
Native ion mobility mass spectrometry studies of potassium inward rectifier channels: insight into gating and lipid bindingDP2GM123486 · NIGMS · TEXAS A&M UNIVERSITY HEALTH SCIENCE CTR · PI LAGANOWSKY, ARTHUR D · 2016 to 2016
$2.2M
Developing High-Resolution Ion Mobility Spectrometry-Charge Detection-Mass Spectrometry for Rapid Analysis in the Megadalton to Gigadalton RegimeR01GM131100 · NIGMS · TRUSTEES OF INDIANA UNIVERSITY · PI CLEMMER, DAVID E., JARROLD, MARTIN F · 2019 to 2022
$2.1M
Development of high resolution mobility measurements for structural biologyR01GM121751 · NIGMS · TRUSTEES OF INDIANA UNIVERSITY · PI CLEMMER, DAVID E., LAGANOWSKY, ARTHUR D · 2017 to 2020
$1.7M
NIGMS NIH HHS DP2 GM123486NIGMS NIH HHS P41 GM128577NIGMS NIH HHS R01 GM121751NIGMS NIH HHS R01 GM131100
6 · The paper itself

Abstract

Chymotrypsin inhibitor 2 (CI-2) is a classic model for two-state cooperative protein folding and is one of the most extensively studied systems. Alan Fersht, a pioneer in the field of structural biology, has studied the wild-type (wt) and over 100 mutant forms of CI-2 with traditional analytical and biochemical techniques. Here, we examine wt CI-2 and three mutant forms (A16G, K11A, L32A) to demonstrate the utility of variable-temperature (vT) electrospray ionization (ESI) paired with ion mobility spectrometry (IMS) and mass spectrometry (MS) to map the free energy folding landscape. As the solution temperature is increased, the abundance of each of the six ESI charge states for wt CI-2 and each mutant is found to vary independently. These results require that at least six unique types of CI-2 solution conformers are present. Ion mobility analysis reveals that within each charge state there are additional conformers having distinct solution temperature profiles. A model of the data at ∼30 different temperatures for all four systems suggests the presence of 41 unique CI-2 solution conformations. A thermodynamic analysis of this system yields values of Δ

Indexed as

Amino Acid SequenceModels, ChemicalMutant ProteinsPeptidesPhase TransitionPlant ProteinsProtein ConformationProtein FoldingSpectrometry, Mass, Electrospray IonizationTemperatureThermodynamicschymotrypsin inhibitor 2Mutant ProteinsPeptidesPlant Proteins

Identifiers

PMID32866376
PMCPMC7702223

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.