Evidence map›Paper›PMID 32860511›Full record

ReviewCurrent genetics2020

Induction of protein aggregation and starvation response by tRNA modification defects.

Roland Klassen, Alexander Bruch, Raffael Schaffrath

Abstract readReview
In one paragraph

Review in Current genetics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Roland KlassenInstitut für Biologie, Fachgebiet Mikrobiologie, Universität Kassel, Heinrich-Plett-Str. 40, 34132, Kassel, Germany. roland.klassen@uni-kassel.de.ORCID http://orcid.org/0000-0002-0809-0050
Alexander BruchInstitut für Biologie, Fachgebiet Mikrobiologie, Universität Kassel, Heinrich-Plett-Str. 40, 34132, Kassel, Germany.
Raffael SchaffrathInstitut für Biologie, Fachgebiet Mikrobiologie, Universität Kassel, Heinrich-Plett-Str. 40, 34132, Kassel, Germany.ORCID http://orcid.org/0000-0001-9484-5247

Funding

Deutsche Forschungsgemeinschaft KL2937/1-2Deutsche Forschungsgemeinschaft SCHA750/15-2Deutsche Forschungsgemeinschaft SCHA750/20-2
6 · The paper itself

Abstract

Posttranscriptional modifications of anticodon loops contribute to the decoding efficiency of tRNAs by supporting codon recognition and loop stability. Consistently, strong synthetic growth defects are observed in yeast strains simultaneously lacking distinct anticodon loop modifications. These phenotypes are accompanied by translational inefficiency of certain mRNAs and disturbed protein homeostasis resulting in accumulation of protein aggregates. Different combinations of anticodon loop modification defects were shown to affect distinct tRNAs but provoke common transcriptional changes that are reminiscent of the cellular response to nutrient starvation. Multiple mechanisms may be involved in mediating inadequate starvation response upon loss of critical tRNA modifications. Recent evidence suggests protein aggregate induction to represent one such trigger.

Indexed as

AnticodonCodonNucleic Acid ConformationProtein AggregatesProtein BiosynthesisRNA Processing, Post-TranscriptionalRNA, TransferSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsAnticodonCodonProtein AggregatesRNA, TransferSaccharomyces cerevisiae ProteinsDecodingProtein aggregationStarvation responsetRNA modification

Identifiers

PMID32860511
PMCPMC7599136

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.