Evidence map›Paper›PMID 32860487›Full record

ArticleObesity (Silver Spring, Md.)2020

Genome-Wide Association Study in 3,173 Outbred Rats Identifies Multiple Loci for Body Weight, Adiposity, and Fasting Glucose.

Apurva S Chitre, Oksana Polesskaya, Katie Holl, Jianjun Gao, Riyan Cheng, Hannah Bimschleger, Angel Garcia Martinez, Tony George, Alexander F Gileta, Wenyan Han and 17 more

Open access · greenAbstract readMulticenter Study
In one paragraph

Article in Obesity (Silver Spring, Md.), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 59 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
59citing papers in PubMed, 1 pooled it
14.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

59 citing papers in PubMed, 1 synthesis or guideline pooled it, 97 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

27 authors at 7 institutions in 2 countries.

Apurva S ChitreDepartment of Psychiatry, University of California, San Diego, La Jolla, California, USA.ORCID 0000-0003-1709-9214
Oksana PolesskayaDepartment of Psychiatry, University of California, San Diego, La Jolla, California, USA.
Katie HollHuman and Molecular Genetic Center, Medical College of Wisconsin, Milwaukee, Wisconsin, USA.
Jianjun GaoDepartment of Psychiatry, University of California, San Diego, La Jolla, California, USA.
Riyan ChengDepartment of Psychiatry, University of California, San Diego, La Jolla, California, USA.
Hannah BimschlegerDepartment of Psychiatry, University of California, San Diego, La Jolla, California, USA.
Angel Garcia MartinezDepartment of Pharmacology, University of Tennessee Health Science Center, Memphis, Tennessee, USA.
Tony GeorgeClinical and Research Institute on Addictions, University at Buffalo, Buffalo, New York, USA.
Alexander F GiletaDepartment of Psychiatry, University of California, San Diego, La Jolla, California, USA.
Wenyan HanDepartment of Pharmacology, University of Tennessee Health Science Center, Memphis, Tennessee, USA.
Aidan HorvathDepartment of Psychiatry, University of Michigan, Ann Arbor, Michigan, USA.
Alesa HughsonDepartment of Psychiatry, University of Michigan, Ann Arbor, Michigan, USA.
Keita IshiwariClinical and Research Institute on Addictions, University at Buffalo, Buffalo, New York, USA.
Christopher P KingDepartment of Psychology, University at Buffalo, Buffalo, New York, USA.
Alexander LamparelliDepartment of Psychology, University at Buffalo, Buffalo, New York, USA.
Cassandra L VersaggiDepartment of Psychology, University at Buffalo, Buffalo, New York, USA.
Connor MartinClinical and Research Institute on Addictions, University at Buffalo, Buffalo, New York, USA.
Celine L St PierreDepartment of Genetics, Washington University, St. Louis, Missouri, USA.
Jordan A TripiDepartment of Psychology, University at Buffalo, Buffalo, New York, USA.
Tengfei WangDepartment of Pharmacology, University of Tennessee Health Science Center, Memphis, Tennessee, USA.
Hao ChenDepartment of Pharmacology, University of Tennessee Health Science Center, Memphis, Tennessee, USA.
Shelly B FlagelMolecular and Behavioral Neuroscience Institute, University of Michigan, Ann Arbor, Michigan, USA.
Paul MeyerDepartment of Psychology, University at Buffalo, Buffalo, New York, USA.
Jerry RichardsClinical and Research Institute on Addictions, University at Buffalo, Buffalo, New York, USA.
Terry E RobinsonDepartment of Psychology, University of Michigan, Ann Arbor, Michigan, USA.
Abraham A PalmerDepartment of Psychiatry, University of California, San Diego, La Jolla, California, USA.
Leah C Solberg WoodsDepartment of Internal Medicine, Wake Forest School of Medicine, Winston-Salem, North Carolina, USA.ORCID 0000-0002-7943-798X
University at Buffalo, State University of New York · USUniversity of California San Diego · USUniversity of Michigan · USUniversity of Tennessee Health Science Center · USSolvay (Belgium) · BEMedical College of Wisconsin · USWashington University in St. Louis · US

Funding

Sequencing CoreP50DA037844 · NIDA · UNIVERSITY OF CHICAGO · PI MEYER, PAUL J · 2014 to 2023
$27.4M
Systems genetics to identify neuronal genes for diet-induced obesityR01DK120667 · NIDDK · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI SOLBERG WOODS, LEAH CATHERINE · 2019 to 2023
$2.9M
Systems Genetics of Adiposity Traits in Outbred RatsR01DK106386 · NIDDK · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI SOLBERG WOODS, LEAH CATHERINE · 2015 to 2018
$2.6M
NIDA NIH HHS P50 DA037844NIDDK NIH HHS R01 DK106386NIDDK NIH HHS R01 DK120667
6 · The paper itself

Abstract

objectiveObesity is influenced by genetic and environmental factors. Despite the success of human genome-wide association studies, the specific genes that confer obesity remain largely unknown. The objective of this study was to use outbred rats to identify the genetic loci underlying obesity and related morphometric and metabolic traits.

methodsThis study measured obesity-relevant traits, including body weight, body length, BMI, fasting glucose, and retroperitoneal, epididymal, and parametrial fat pad weight in 3,173 male and female adult N/NIH heterogeneous stock (HS) rats across three institutions, providing data for the largest rat genome-wide association study to date. Genetic loci were identified using a linear mixed model to account for the complex family relationships of the HS and using covariates to account for differences among the three phenotyping centers.

resultsThis study identified 32 independent loci, several of which contained only a single gene (e.g., Epha5, Nrg1, Klhl14) or obvious candidate genes (e.g., Adcy3, Prlhr). There were strong phenotypic and genetic correlations among obesity-related traits, and there was extensive pleiotropy at individual loci.

conclusionsThis study demonstrates the utility of HS rats for investigating the genetics of obesity-related traits across institutions and identify several candidate genes for future functional testing.

Indexed as

AdiposityAnimalsBody WeightFastingFemaleGenetic LociGenome-Wide Association StudyGlucoseMaleObesityPolymorphism, Single NucleotideRatsGlucose

Identifiers

PMID32860487
PMCPMC7511439
OpenAlexW3082963240

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.