Evidence map›Paper›PMID 32860342›Full record

ArticleJournal of cellular and molecular medicine2020

Characterization of a non-coding RNA-associated ceRNA network in metastatic lung adenocarcinoma.

Feifei Fan, Yu Ping, Li Yang, Xiaoran Duan, Nomathamsanqa Resegofetse Maimela, Bingjie Li, Xiangnan Li, Jing Chen, Kai Zhang, Liping Wang and 4 more

Open access · goldAbstract read
In one paragraph

Article in Journal of cellular and molecular medicine, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.5field-weighted citation impact, top 43% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 2 institutions in 1 country.

Feifei FanBiotherapy Center, The First Affiliated Hospital of Zhengzhou University, Zhengzhou, China.
Yu PingBiotherapy Center, The First Affiliated Hospital of Zhengzhou University, Zhengzhou, China.
Li YangBiotherapy Center, The First Affiliated Hospital of Zhengzhou University, Zhengzhou, China.
Xiaoran DuanBiotherapy Center, The First Affiliated Hospital of Zhengzhou University, Zhengzhou, China.
Nomathamsanqa Resegofetse MaimelaBiotherapy Center, The First Affiliated Hospital of Zhengzhou University, Zhengzhou, China.
Bingjie LiCancer Center, The First Affiliated of Zhengzhou University, Zhengzhou, China.
Xiangnan LiDepartment of Thoracic Surgery, The First Affiliated Hospital of Zhengzhou University, Zhengzhou, China.
Jing ChenRespiratory and Critical Care Medicine, The First Affiliated Hospital of Zhengzhou University, Zhengzhou, China.
Kai ZhangRespiratory and Critical Care Medicine, The First Affiliated Hospital of Zhengzhou University, Zhengzhou, China.
Liping WangCancer Center, The First Affiliated of Zhengzhou University, Zhengzhou, China.
Shasha LiuBiotherapy Center, The First Affiliated Hospital of Zhengzhou University, Zhengzhou, China.
Xuan ZhaoBiotherapy Center, The First Affiliated Hospital of Zhengzhou University, Zhengzhou, China.
Hongmin WangRespiratory and Critical Care Medicine, The First Affiliated Hospital of Zhengzhou University, Zhengzhou, China.
Yi ZhangBiotherapy Center, The First Affiliated Hospital of Zhengzhou University, Zhengzhou, China.ORCID 0000-0001-9861-4681
First Affiliated Hospital of Zhengzhou University · CNZhengzhou University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Lung adenocarcinoma (LUAD) is a highly malignant cancer. Although competing endogenous RNA (ceRNA)-based profiling has been investigated in patients with LUAD, it has not been specifically used to study metastasis in LUAD. We found 130 differentially expressed (DE) lncRNAs, 32 DE miRNAs and 981 DE mRNAs from patients with LUAD in The Cancer Genome Atlas (TCGA) database. We analysed the functions and pathways of 981 DE mRNAs using the Gene Ontology (GO) and the Kyoto Encyclopedia of Genes and Genomes (KEGG) databases. Based on the target DE mRNAs and DE lncRNAs of DE miRNAs, we established an lncRNA-miRNA-mRNA ceRNA network, comprising 37 DE lncRNAs, 22 DE miRNAs and 212 DE mRNAs. Subsequently, we constructed a protein-protein interaction network of DE mRNAs in the ceRNA network. Among all, DE RNAs, 5 DE lncRNAs, 5 DE miRNAs and 45 DE mRNAs were confirmed found to be associated with clinical prognosis. Moreover, 3 DE lncRNAs, 4 DE miRNAs and 9 DE mRNAs in the ceRNA network were associated with clinical prognosis. We further screened 3 DE lncRNAs, 3 DE miRNAs and 3 DE mRNAs using clinical samples. These DE lncRNAs, DE miRNAs and DE mRNAs in ceRNA network may serve as independent biomarkers of LUAD metastasis.

Indexed as

Gene Regulatory NetworksAdenocarcinoma of LungCluster AnalysisDown-RegulationGene Expression ProfilingGene Expression Regulation, NeoplasticGene OntologyHumansKaplan-Meier EstimateLung NeoplasmsMicroRNAsNeoplasm MetastasisProtein Interaction MapsRNA, Long NoncodingRNA, MessengerUp-RegulationMicroRNAsRNA, Long NoncodingRNA, MessengerceRNA networklung adenocarcinomametastasisPPI networksurvival

Identifiers

PMID32860342
PMCPMC7579711
OpenAlexW3082899509

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.