Evidence map›Paper›PMID 32859172›Full record

ArticleBMC plant biology2020

Genome-wide association study identifies candidate genes related to oleic acid content in soybean seeds.

Xiaoyi Liu, Di Qin, Angela Piersanti, Qi Zhang, Cristina Miceli, Piwu Wang

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
4.9field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 28 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Xiaoyi LiuResearch Center of Integrative Medicine, School of Basic Medical Sciences, Guangzhou University of Chinese Medicine, Guangzhou, 510006, Guangdong, PR China.
Di QinSchool of Biosciences and Veterinary Medicine, University of Camerino, Camerino, MC, Italy. di.qin@unicam.it.
Angela PiersantiSchool of Biosciences and Veterinary Medicine, University of Camerino, Camerino, MC, Italy.
Qi ZhangBiotechnology Center of Jilin Agricultural University, Jilin Agricultural University, Changchun, 130118, PR China.
Cristina MiceliSchool of Biosciences and Veterinary Medicine, University of Camerino, Camerino, MC, Italy. Cristina.Miceli@unicam.it.
Piwu WangBiotechnology Center of Jilin Agricultural University, Jilin Agricultural University, Changchun, 130118, PR China. wangpiwu189@163.com.ORCID http://orcid.org/0000-0001-7887-6852
Università di Camerino · ITJilin Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundSoybean oil is a complex mixture of five fatty acids (palmitic, stearic, oleic, linoleic, and linolenic). Soybean oil with a high oleic acid content is desirable because this monounsaturated fatty acid improves the oxidative stability of the oil. To investigate the genetic architecture of oleic acid in soybean seeds, 260 soybean germplasms from Northeast China were collected as natural populations. A genome-wide association study (GWAS) was conducted on a panel of 260 germplasm resources.

resultsPhenotypic identification results showed that the oleic acid content varied from 8.2 to 35.0%. A total of 2,311,337 single-nucleotide polymorphism (SNP) markers were obtained. GWAS analysis showed that there were many genes related to oleic acid content with a contribution rate of 7%. The candidate genes Glyma.11G229600.1 on chromosome 11 and Glyma.04G102900.1 on chromosome 4 were detected in a 2-year-long GWAS. The candidate gene Glyma.11G229600.1 showed a positive correlation with the oleic acid content, and the correlation coefficient was 0.980, while Glyma.04G102900.1 showed a negative correlation, with a coefficient of - 0.964.

conclusionsGlyma.04G102900.1 on chromosome 4 and Glyma.11G229600.1 on chromosome 11 were detected in both analyses (2018 and 2019). Glyma.04G102900.1 and Glyma.11G229600.1 are new key candidate genes related to oleic acid in soybean seeds. These results will be useful for high-oleic soybean breeding.

Indexed as

Genes, PlantGenome-Wide Association StudyPolymorphism, Single NucleotideChinaGenetic MarkersGenome, PlantGlycine maxOleic AcidSeedsSoybean OilGenetic MarkersOleic AcidSoybean OilGenome-wide association studyOleic acidOleic acid-associated genesSNPsSoybean

Identifiers

PMID32859172
PMCPMC7456086
OpenAlexW3081969688

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.