Evidence map›Paper›PMID 32858868›Full record

ArticleGenes2020

Bioinformatics Analysis Revealed Novel 3'UTR Variants Associated with Intellectual Disability.

Junmeng Yang, Anna Liu, Isabella He, Yongsheng Bai

Open access · goldAbstract read
In one paragraph

Article in Genes, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 14 citations in OpenAlex.

  1. Two novel SNPs identified inAnimal biotechnology · 2023
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Junmeng YangShanghai Starriver Bilingual School, Shanghai 201100, China.
Anna LiuAppleby College, Oakville, ON L6L3V7, Canada.
Isabella HePittsford Mendon High School, 472 Mendon Road, Pittsford, NY 14534, USA.
Yongsheng BaiNext-Gen Intelligent Science Training, Ann Arbor, MI 48105, USA.
Eastern Michigan University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

MicroRNAs (or miRNAs) are short nucleotide sequences (~17-22 bp long) that play important roles in gene regulation through targeting genes in the 3'untranslated regions (UTRs). Variants located in genomic regions might have different biological consequences in changing gene expression. Exonic variants (e.g., coding variant and 3'UTR variant) are often causative of diseases due to their influence on gene product. Variants harbored in the 3'UTR region where miRNAs perform their targeting function could potentially alter the binding relationships for target pairs, which could relate to disease causation. We gathered miRNA-mRNA targeting pairs from published studies and then employed the database of microRNA Target Site single nucleotide variants (SNVs) (dbMTS) to discover novel SNVs within the selected pairs. We identified a total of 183 SNVs for the 114 pairs of accurate miRNA-mRNA targeting pairs selected. Detailed bioinformatics analysis of the three genes with identified variants that were exclusively located in the 3'UTR section indicated their association with intellectual disability (ID). Our result showed an exceptionally high expression of

Indexed as

Gene Expression Regulation3' Untranslated RegionsAnimalsBrainComputational BiologyCyclin-Dependent Kinase 6Genome, HumanHumansIntellectual DisabilityMiceMicroRNAsPolymorphism, Single NucleotideRatsReceptors, G-Protein-CoupledRNA, MessengerWnt Proteins3' Untranslated RegionsCDK6 protein, humanCyclin-Dependent Kinase 6GPR88 protein, humanMicroRNAsReceptors, G-Protein-CoupledRNA, MessengerWNT7A protein, humanWnt Proteins3′UTRintellectual disabilitymiRNA targetingsingle nucleotide variants

Identifiers

PMID32858868
PMCPMC7563394
OpenAlexW3080348208

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.