Evidence map›Paper›PMID 32858766›Full record

ArticleThe New phytologist2021

Allelic variation in rice Fertilization Independent Endosperm 1 contributes to grain width under high night temperature stress.

Balpreet K Dhatt, Puneet Paul, Jaspreet Sandhu, Waseem Hussain, Larissa Irvin, Feiyu Zhu, Maria Arlene Adviento-Borbe, Argelia Lorence, Paul Staswick, Hongfeng Yu and 2 more

Open access · hybridAbstract read
In one paragraph

Article in The New phytologist, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
4.9field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 68 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 1 country.

Balpreet K DhattDepartment of Agronomy and Horticulture, University of Nebraska-Lincoln, Lincoln, NE, 68583, USA.ORCID 0000-0002-3577-962X
Puneet PaulDepartment of Agronomy and Horticulture, University of Nebraska-Lincoln, Lincoln, NE, 68583, USA.ORCID 0000-0001-8220-8021
Jaspreet SandhuDepartment of Agronomy and Horticulture, University of Nebraska-Lincoln, Lincoln, NE, 68583, USA.ORCID 0000-0001-7863-2532
Waseem HussainDepartment of Agronomy and Horticulture, University of Nebraska-Lincoln, Lincoln, NE, 68583, USA.ORCID 0000-0002-6861-0193
Larissa IrvinDepartment of Agronomy and Horticulture, University of Nebraska-Lincoln, Lincoln, NE, 68583, USA.
Feiyu ZhuDepartment of Computer Science and Engineering, University of Nebraska-Lincoln, Lincoln, NE, 68588, USA.
Maria Arlene Adviento-BorbeDelta Water Management Research Unit, USDA-ARS, Jonesboro, AR, 72401, USA.
Argelia LorenceDepartment of Chemistry and Physics, Arkansas Biosciences Institute, Arkansas State University, Jonesboro, AR, 72467, USA.ORCID 0000-0001-9844-8820
Paul StaswickDepartment of Agronomy and Horticulture, University of Nebraska-Lincoln, Lincoln, NE, 68583, USA.ORCID 0000-0003-2798-0275
Hongfeng YuDepartment of Computer Science and Engineering, University of Nebraska-Lincoln, Lincoln, NE, 68588, USA.
Gota MorotaDepartment of Animal and Poultry Sciences, Virginia Polytechnic Institute and State University, Blacksburg, VA, 24061, USA.ORCID 0000-0002-3567-6911
Harkamal WaliaDepartment of Agronomy and Horticulture, University of Nebraska-Lincoln, Lincoln, NE, 68583, USA.ORCID 0000-0002-9712-5824
University of Nebraska–Lincoln · USArkansas State University · USDelta Water Management Research Unit · USVirginia Tech · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A higher minimum (night-time) temperature is considered a greater limiting factor for reduced rice yield than a similar increase in maximum (daytime) temperature. While the physiological impact of high night temperature (HNT) has been studied, the genetic and molecular basis of HNT stress response remains unexplored. We examined the phenotypic variation for mature grain size (length and width) in a diverse set of rice accessions under HNT stress. Genome-wide association analysis identified several HNT-specific loci regulating grain size as well as loci that are common for optimal and HNT stress conditions. A novel locus contributing to grain width under HNT conditions colocalized with Fie1, a component of the FIS-PRC2 complex. Our results suggest that the allelic difference controlling grain width under HNT is a result of differential transcript-level response of Fie1 in grains developing under HNT stress. We present evidence to support the role of Fie1 in grain size regulation by testing overexpression (OE) and knockout mutants under heat stress. The OE mutants were either unaltered or had a positive impact on mature grain size under HNT, while the knockouts exhibited significant grain size reduction under these conditions.

Indexed as

OryzaEdible GrainEndospermFertilizationGenome-Wide Association StudyTemperatureFIS-PRC2genome-wide association analysisgrain developmentgrain qualitygrain sizeheat stressricestarch

Identifiers

PMID32858766
PMCPMC7756756
OpenAlexW3081560937

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.