Evidence map›Paper›PMID 32857462›Full record

ArticleJournal of biophotonics2020

Automated vessel diameter quantification and vessel tracing for OCT angiography.

Wei Wei, Qinqin Zhang, Samuel G Rayner, Wan Qin, Yuxuan Cheng, Fupeng Wang, Ying Zheng, Ruikang K Wang

Open access · greenAbstract read
In one paragraph

Article in Journal of biophotonics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.5field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Wei WeiDepartment of Bioengineering, University of Washington, Seattle, Washington, USA.ORCID 0000-0002-1731-9339
Qinqin ZhangDepartment of Bioengineering, University of Washington, Seattle, Washington, USA.
Samuel G RaynerDepartment of Bioengineering, University of Washington, Seattle, Washington, USA.
Wan QinDepartment of Bioengineering, University of Washington, Seattle, Washington, USA.
Yuxuan ChengDepartment of Bioengineering, University of Washington, Seattle, Washington, USA.
Fupeng WangDepartment of Bioengineering, University of Washington, Seattle, Washington, USA.
Ying ZhengDepartment of Bioengineering, University of Washington, Seattle, Washington, USA.
Ruikang K WangDepartment of Bioengineering, University of Washington, Seattle, Washington, USA.ORCID 0000-0001-5169-8822
University of Washington · US

Funding

Perfusable 3D human cardiac constructs for heart regenerationR01HL141570 · NHLBI · UNIVERSITY OF WASHINGTON · PI MURRY, CHARLES E, ZHENG, YING · 2018 to 2021
$3.3M
NHLBI NIH HHS R01 HL141570NHLBI NIH HHS R01HL141570
6 · The paper itself

Abstract

Optical coherence tomography angiography (OCTA) is capable of non-invasively imaging the vascular networks within circulatory tissue beds in vivo. Following improvements in OCTA image quality, it is now possible to extract vascular parameters from imaging data to potentially facilitate the diagnosis and treatment of human disease. In this paper, we present a method for automated mapping of vessel diameter down to the individual capillary level, through gradient-guided minimum radial distance (MRD). During validation using well-characterized microfluidic flow phantoms, this method demonstrated superior consistency and a nearly threefold decrease in error when compared to currently accepted techniques. In addition, the MRD technique exhibited a high tolerance to rotation of the vasculature pattern. We also incorporated a modified A* path searching algorithm to trace vessel branches and calculate the diameter of each branch from the OCTA images. After validation in vitro, we applied these algorithms to the in vivo setting through analysis of mouse cortical vasculature. Our algorithm returned results that followed Murray's law, until reaching the capillary level, agreeing well with known physiological data. From our tracing process, vessel tortuosity and branching angle could also be measured. Our techniques provide a platform for the automated evaluation of the vasculature and may aid in diagnosis of vascular diseases, especially those resulting in regional early-stage morphological changes.

Indexed as

AngiographyTomography, Optical CoherenceAlgorithmsCapillariesRetinal Vesselsbranching angleGUI analysis platformOCTOCT angiographyphantom validationvasculature quantificationvessel diametervessel tortuosityvessel tracing

Identifiers

PMID32857462
PMCPMC7857721
OpenAlexW3082070310

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.