Evidence map›Paper›PMID 32857336›Full record

ArticleFolia microbiologica2020

RamA, a transcriptional regulator conferring florfenicol resistance in Leclercia adecarboxylata R25.

Cong Cheng, Yuanyuan Ying, Danying Zhou, Licheng Zhu, Junwan Lu, Aifang Li, Qiyu Bao, Mei Zhu

Open access · hybridAbstract read
In one paragraph

Article in Folia microbiologica, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Frontiers in microbiology · 2022
    Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Cong Cheng *Vocational and Technical College, Lishui University, Lishui, 323000, China.
Yuanyuan Ying *Medical Research Center, Taizhou Hospital of Zhejiang Province, Taizhou, 317000, Zhejiang, China.
Danying ZhouSchool of Laboratory Medicine and Life Sciences/Institute of Biomedical Informatics, Wenzhou Medical University, Wenzhou, 325035, Zhejiang, China.
Licheng ZhuVocational and Technical College, Lishui University, Lishui, 323000, China.
Junwan LuMedical Research Center, Taizhou Hospital of Zhejiang Province, Taizhou, 317000, Zhejiang, China.
Aifang LiThe Fifth Affiliated Hospital, Wenzhou Medical University, Lishui, 323000, Zhejiang, China.
Qiyu BaoMedical Research Center, Taizhou Hospital of Zhejiang Province, Taizhou, 317000, Zhejiang, China.
Mei ZhuDepartment of Clinical Laboratory, Zhejiang Hospital, Hangzhou, 310013, Zhejiang, China. zhumei_d@163.com.ORCID http://orcid.org/0000-0003-3625-8794
Wenzhou Medical University · CNLishui University · CNZhejiang Hospital · CN

Funding

Natural Science Foundation of Zhejiang Province LY19C060002Natural Science Foundation of Zhejiang Province Nos. LQ17H190001
6 · The paper itself

Abstract

Due to the inappropriate use of florfenicol in agricultural practice, florfenicol resistance has become increasingly serious. In this work, we studied the novel florfenicol resistance mechanism of an animal-derived Leclercia adecarboxylata strain R25 with high-level florfenicol resistance. A random genomic DNA library was constructed to screen the novel florfenicol resistance gene. Gene cloning, gene knockout, and complementation combined with the minimum inhibitory concentration (MIC) detection were conducted to determine the function of the resistance-related gene. Sequencing and bioinformatics methods were applied to analyze the structure of the resistance gene-related sequences. Finally, we obtained a regulatory gene of an RND (resistance-nodulation-cell division) system, ramA, that confers resistance to florfenicol and other antibiotics. The ramA-deleted variant (LA-R25ΔramA) decreased the level of resistance against florfenicol and several other antibiotics, while a ramA-complemented strain (pUCP24-prom-ramA/LA-R25ΔramA) restored the drug resistance. The whole-genome sequencing revealed that there were five RND efflux pump genes (mdtABC, acrAB, acrD, acrEF, and acrAB-like) encoded over the chromosome, and ramA located upstream of the acrAB-like genes. The results of this work suggest that ramA confers resistance to florfenicol and other structurally unrelated antibiotics, presumably by regulating the RND efflux pump genes in L. adecarboxylata R25.

Indexed as

Anti-Bacterial AgentsBacterial ProteinsCloning, MolecularComputational BiologyDrug Resistance, Multiple, BacterialEnterobacteriaceaeEscherichia coliGene Knockout TechniquesMicrobial Sensitivity TestsRNA, Ribosomal, 16SThiamphenicolTrans-ActivatorsWhole Genome SequencingAnti-Bacterial AgentsBacterial ProteinsflorfenicolRNA, Ribosomal, 16SThiamphenicolTrans-ActivatorsComparative genomicsFlorfenicolLeclercia adecarboxylataramAResistance-nodulation-division

Identifiers

PMID32857336
PMCPMC7716942
OpenAlexW3081957475

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.