Evidence map›Paper›PMID 32856260›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2021

Design and Generation of Self-Assembling Peptide Virus-like Particles with Intrinsic GPCR Inhibitory Activity.

Sergey G Tarasov, Marzena Dyba, Joshua Yu, Nadya Tarasova

Abstract read
In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Sergey G TarasovStructural Biophysics Laboratory, National Cancer Institute, Frederick, MD, USA.
Marzena DybaBasic Science Program, Frederick National Laboratory for Cancer Research, Frederick, MD, USA.
Joshua YuLaboratory of Cancer Immunometabolism, National Cancer Institute, Frederick, MD, USA.
Nadya TarasovaLaboratory of Cancer Immunometabolism, National Cancer Institute, Frederick, MD, USA. Nadya.Tarasova@nih.gov.

Funding

CCR Biophysics Resource CoreZICBC010965 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI TARASOV, SERGEY · 2009 to 2025
$10.5M
Inhibitors of protein-protein interactionsZIABC011306 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI TARASOVA, NADYA · 2010 to 2025
$7.3M
Self-assembling protoviral nanoparticlesZIABC011307 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI TARASOVA, NADYA · 2010 to 2022
$2.7M
Intramural NIH HHS ZIA BC011306Intramural NIH HHS ZIC BC010965NCI NIH HHS HHSN261200800001E
6 · The paper itself

Abstract

Synthetic analogs of the second transmembrane domain (TM) containing a portion of the extracellular loop 1 of G-protein-coupled receptors (GPCR) can serve as biased antagonists of the corresponding receptor. Analogs with negative charges added to the extracellular end self-assemble into round structures. Addition of polyethylene glycol chains of defined length to the C-terminus of the peptides prevents super aggregation and results in highly uniform particles that can fuse with cell membranes spontaneously. Added PEG chains slow down cell fusion, while attachment of receptor ligands to the surface of particles results in receptor-mediated membrane fusion and cell-selective delivery. Critical assembly concentration of TM peptide particles is in the nanomolar range and thus requires nontraditional methods of determination. In this chapter, we outline sequence selection and design of self-assembling GPCR antagonists, methods of the preparation of the nanoparticles, and biophysical methods of particle characterization. The protocols allow for straightforward rational design, generation, and characterization of self-assembling GPCR antagonists for a variety of applications.

Indexed as

Amino Acid SequenceCell MembraneNanoparticlesPeptidesPolyethylene GlycolsProtein DomainsReceptors, G-Protein-CoupledPeptidesPolyethylene GlycolsReceptors, G-Protein-CoupledChemokine receptorDifferential scanning fluorimetryDynamic light scatteringG-protein-coupled receptorsMicroscale thermophoresisTransmembrane peptide

Identifiers

PMID32856260
PMCPMC10801811

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.