Evidence map›Paper›PMID 32856169›Full record

ArticleHuman cell2021

BL1391: an established cell line from a human malignant peripheral nerve sheath tumor with unique genomic features.

Doron Tolomeo, Antonio Agostini, Gemma Macchia, Alberto L'Abbate, Marco Severgnini, Ingrid Cifola, Maria Antonia Frassanito, Vito Racanelli, Antonio Giovanni Solimando, Felix Haglund and 2 more

Abstract read
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In one paragraph

Article in Human cell, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.3field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 6 citations in OpenAlex.

  1. Review
  2. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 6 institutions in 2 countries.

Doron TolomeoDepartment of Biology, University of Bari "Aldo Moro", Via G. Orabona no. 4, 70125, Bari, Italy.
Antonio AgostiniDepartment of Biomedical Sciences and Human Oncology, Unit of Internal Medicine "Guido Baccelli", University of Bari Medical School, Piazza Giulio Cesare 11, 70124, Bari, Italy.
Gemma MacchiaDepartment of Biology, University of Bari "Aldo Moro", Via G. Orabona no. 4, 70125, Bari, Italy.
Alberto L'AbbateDepartment of Biology, University of Bari "Aldo Moro", Via G. Orabona no. 4, 70125, Bari, Italy.
Marco SevergniniInstitute for Biomedical Technologies, National Research Council (ITB-CNR), Segrate, 20090, Milan, Italy.
Ingrid CifolaInstitute for Biomedical Technologies, National Research Council (ITB-CNR), Segrate, 20090, Milan, Italy.
Maria Antonia FrassanitoDepartment of Biomedical Sciences and Human Oncology, Unit of Internal Medicine "Guido Baccelli", University of Bari Medical School, Piazza Giulio Cesare 11, 70124, Bari, Italy.
Vito RacanelliDepartment of Biomedical Sciences and Human Oncology, Unit of Internal Medicine "Guido Baccelli", University of Bari Medical School, Piazza Giulio Cesare 11, 70124, Bari, Italy.
Antonio Giovanni SolimandoDepartment of Biomedical Sciences and Human Oncology, Unit of Internal Medicine "Guido Baccelli", University of Bari Medical School, Piazza Giulio Cesare 11, 70124, Bari, Italy.
Felix HaglundDepartment of Pathology and Cytology, Karolinska University Hospital, Stockholm, Sweden.
Fredrik MertensDepartment of Clinical Genetics, Lund University and Skåne University Hospital, 221 85, Lund, Sweden.
Clelia Tiziana StorlazziDepartment of Biology, University of Bari "Aldo Moro", Via G. Orabona no. 4, 70125, Bari, Italy. cleliatiziana.storlazzi@uniba.it.ORCID http://orcid.org/0000-0002-1696-0028
University of Bari Aldo Moro · ITInstitute of Biomedical Technologies · ITInstitute of Biomembranes, Bioenergetics and Molecular Biotechnologies · ITIstituto Tumori Bari · ITKarolinska University Hospital · SELund University · SE

Funding

Associazione Italiana per la Ricerca sul Cancro 15413Associazione Italiana per la Ricerca sul Cancro 20441Swedish Cancer Society CAN2017/269Telemielolab INNOLABS - POR Puglia FESR-FSE 2014-2020
6 · The paper itself

Abstract

Malignant peripheral nerve sheath tumors (MPNSTs) are aggressive tumors, accounting for around 5% of all soft tissue sarcomas. A better understanding of the pathogenesis of these tumors and the development of effective treatments are needed. In this context, established tumor cell lines can be very informative, as they may be used for in-depth molecular analyses and improvement of treatment strategies. Here, we present the genomic and transcriptomic profiling analysis of a MPNST cell line (BL1391) that was spontaneously established in our laboratory from a primary tumor that had not been exposed to genotoxic treatment. This cell line shows peculiar genetic features, such as a large marker chromosome composed of high-copy number amplifications of regions from chromosomes 1 and 11 with an embedded neocentromere. Moreover, the transcriptome profiling revealed the presence of several fusion transcripts involving the CACHD1, TNMA4, MDM4, and YAP1 genes, all of which map to the amplified regions of the marker. BL1391 could be a useful tool to study genomic amplifications and neocentromere seeding in MPNSTs and to develop new therapeutic strategies.

Indexed as

Adaptor Proteins, Signal TransducingAged, 80 and overCell Cycle ProteinsCell Line, TumorCyclin D1Cyclin-Dependent Kinase 4FemaleGene AmplificationGene Expression ProfilingHumansMembrane ProteinsNerve Sheath NeoplasmsPeripheral Nervous System NeoplasmsProto-Oncogene ProteinsTranscription FactorsYAP-Signaling ProteinsAdaptor Proteins, Signal TransducingCACHD1 protein, humanCDK4 protein, humanCell Cycle ProteinsCyclin D1Cyclin-Dependent Kinase 4MDM4 protein, humanMembrane ProteinsProto-Oncogene ProteinsTranscription FactorsYAP1 protein, humanYAP-Signaling ProteinsAmplificationBL1391Fusion transcriptMPNSTNeocentromere

Identifiers

PMID32856169
OpenAlexW3082714852

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.