Evidence map›Paper›PMID 32855408›Full record

ArticleScientific data2020

Chia, a large annotated corpus of clinical trial eligibility criteria.

Fabrício Kury, Alex Butler, Chi Yuan, Li-Heng Fu, Yingcheng Sun, Hao Liu, Ida Sim, Simona Carini, Chunhua Weng

Abstract readDataset
In one paragraph

Article in Scientific data, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed.

  1. Article
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  4. A Multi-Model LLM Consensus Framework to Identify EHR-Predictable Eligibility Criteria in NSCLC Immunotherapy Trials.AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science · 2026
    Article
  5. Article
  6. Article
  7. Article
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  9. Article
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  13. Parsing Clinical Trial Eligibility Criteria for Cohort Query by a Multi-Input Multi-Output Sequence Labeling Model.Proceedings. IEEE International Conference on Bioinformatics and Biomedicine · 2023
    Article
  14. Review
  15. Text Classification of Cancer Clinical Trial Eligibility Criteria.AMIA ... Annual Symposium proceedings. AMIA Symposium · 2023
    Article
  16. Article
  17. Article
  18. Trustworthy assertion classification through prompting.Journal of biomedical informatics · 2022
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Fabrício Kury *Columbia University in the City of New York, New York, NY, United States.
Alex Butler *Columbia University in the City of New York, New York, NY, United States.
Chi Yuan *Columbia University in the City of New York, New York, NY, United States.
Li-Heng FuColumbia University in the City of New York, New York, NY, United States.
Yingcheng SunColumbia University in the City of New York, New York, NY, United States.
Hao LiuColumbia University in the City of New York, New York, NY, United States.
Ida SimUniversity of California, San Francisco, San Francisco, CA, United States.ORCID http://orcid.org/0000-0002-1045-8459
Simona CariniUniversity of California, San Francisco, San Francisco, CA, United States.
Chunhua WengColumbia University in the City of New York, New York, NY, United States. chunhua@columbia.edu.

Funding

Clinical and Translational Science AwardUL1TR001873 · NCATS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI REILLY, MUREDACH P · 2016 to 2025
$99.0M
Bridging the Semantic Gap Between Research Eligibility Criteria and Clinical DataR01LM009886 · NLM · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI WENG, CHUNHUA · 2009 to 2020
$5.3M
SHORT-TERM TRAINING: STUDENTS IN PROFESSIONAL SCHOOLST35HL007616 · NHLBI · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI RUDOLPH L LEIBEL, Markus Y Mapara · 1985 to 2026
$4.4M
NCATS NIH HHS UL1 TR001873NHLBI NIH HHS T35 HL007616NLM NIH HHS R01 LM009886
6 · The paper itself

Abstract

We present Chia, a novel, large annotated corpus of patient eligibility criteria extracted from 1,000 interventional, Phase IV clinical trials registered in ClinicalTrials.gov. This dataset includes 12,409 annotated eligibility criteria, represented by 41,487 distinctive entities of 15 entity types and 25,017 relationships of 12 relationship types. Each criterion is represented as a directed acyclic graph, which can be easily transformed into Boolean logic to form a database query. Chia can serve as a shared benchmark to develop and test future machine learning, rule-based, or hybrid methods for information extraction from free-text clinical trial eligibility criteria.

Indexed as

Clinical Trials, Phase IV as TopicHumans

Identifiers

PMID32855408
PMCPMC7452886

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.