Evidence map›Paper›PMID 32855302›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2020

Conformational diversity facilitates antibody mutation trajectories and discrimination between foreign and self-antigens.

Deborah L Burnett, Peter Schofield, David B Langley, Jennifer Jackson, Katherine Bourne, Emily Wilson, Benjamin T Porebski, Ashley M Buckle, Robert Brink, Christopher C Goodnow and 1 more

Open access · hybridAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
1.7field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 27 citations in OpenAlex.

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  9. Central tolerance shapes the neutralizing B cell repertoire against a persisting virus in its natural host.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
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  15. Features of B Cell Responses Relevant to Allergic Disease.Journal of immunology (Baltimore, Md. : 1950) · 2022
    Review
  16. Review
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  18. Review
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

Deborah L BurnettGarvan Institute of Medical Research, University of New South Wales (UNSW) Sydney, Darlinghurst, NSW 2010, Australia.ORCID 0000-0002-5642-3315
Peter SchofieldGarvan Institute of Medical Research, University of New South Wales (UNSW) Sydney, Darlinghurst, NSW 2010, Australia.
David B LangleyGarvan Institute of Medical Research, University of New South Wales (UNSW) Sydney, Darlinghurst, NSW 2010, Australia.ORCID 0000-0003-2752-0041
Jennifer JacksonGarvan Institute of Medical Research, University of New South Wales (UNSW) Sydney, Darlinghurst, NSW 2010, Australia.
Katherine BourneGarvan Institute of Medical Research, University of New South Wales (UNSW) Sydney, Darlinghurst, NSW 2010, Australia.
Emily WilsonDepartment of Biochemistry and Molecular Biology, Biomedicine Discovery Institute, Monash University, Clayton, VIC 3168, Australia.ORCID 0000-0002-8658-4072
Benjamin T PorebskiMedical Research Council Laboratory of Molecular Biology, CB2 OQH Cambridge, United Kingdom.
Ashley M BuckleDepartment of Biochemistry and Molecular Biology, Biomedicine Discovery Institute, Monash University, Clayton, VIC 3168, Australia.
Robert BrinkGarvan Institute of Medical Research, University of New South Wales (UNSW) Sydney, Darlinghurst, NSW 2010, Australia.
Christopher C GoodnowGarvan Institute of Medical Research, University of New South Wales (UNSW) Sydney, Darlinghurst, NSW 2010, Australia; c.goodnow@garvan.org.au d.christ@garvan.org.au.ORCID 0000-0001-5296-6155
Daniel ChristGarvan Institute of Medical Research, University of New South Wales (UNSW) Sydney, Darlinghurst, NSW 2010, Australia; c.goodnow@garvan.org.au d.christ@garvan.org.au.
Garvan Institute of Medical Research · AUAustralian Regenerative Medicine Institute · AUMRC Laboratory of Molecular Biology · GB

Funding

Medical Research Council MC_U105178804
6 · The paper itself

Abstract

Conformational diversity and self-cross-reactivity of antigens have been correlated with evasion from neutralizing antibody responses. We utilized single cell B cell sequencing, biolayer interferometry and X-ray crystallography to trace mutation selection pathways where the antibody response must resolve cross-reactivity between foreign and self-proteins bearing near-identical contact surfaces, but differing in conformational flexibility. Recurring antibody mutation trajectories mediate long-range rearrangements of framework (FW) and complementarity determining regions (CDRs) that increase binding site conformational diversity. These antibody mutations decrease affinity for self-antigen 19-fold and increase foreign affinity 67-fold, to yield a more than 1,250-fold increase in binding discrimination. These results demonstrate how conformational diversity in antigen and antibody does not act as a barrier, as previously suggested, but rather facilitates high affinity and high discrimination between foreign and self.

Indexed as

AntibodiesAutoantigensAnimalsAntibody AffinityAntibody DiversityAutoantibodiesComplementarity Determining RegionsGene Rearrangement, B-LymphocyteImmunity, HumoralMiceModels, MolecularMutationProtein ConformationSomatic Hypermutation, ImmunoglobulinAntibodiesAutoantibodiesAutoantigensComplementarity Determining Regionsaffinity maturationautoantibody redemptionclonal selectionhumoral immunitysomatic hypermutation

Identifiers

PMID32855302
PMCPMC7486785
OpenAlexW3081116079

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.