Evidence map›Paper›PMID 32854753›Full record

ArticleParasites & vectors2020

Performance of a universal PCR assay to identify different Leishmania species causative of Old World cutaneous leishmaniasis.

Mahmoud Nateghi Rostami, Fatemeh Darzi, Mahin Farahmand, Mohsen Aghaei, Parviz Parvizi

Open access · goldAbstract read
In one paragraph

Article in Parasites & vectors, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.8field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Presence or Emergence of Canine Leishmaniasis, Malawi.Emerging infectious diseases · 2026
    Article
  3. Article
  4. Review
  5. Rapid detection, quantification and speciation ofbioRxiv : the preprint server for biology · 2024
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  10. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Mahmoud Nateghi RostamiLaboratory of Host-Parasite Interactions, Department of Parasitology, Pasteur Institute of Iran, Tehran, Iran. m_nateghi@pasteur.ac.ir.
Fatemeh DarziLaboratory of Host-Parasite Interactions, Department of Parasitology, Pasteur Institute of Iran, Tehran, Iran.
Mahin FarahmandLaboratory of Host-Parasite Interactions, Department of Parasitology, Pasteur Institute of Iran, Tehran, Iran.
Mohsen AghaeiQom University of Medical Sciences, Qom, Iran.
Parviz ParviziMolecular Systematics Laboratory, Department of Parasitology, Pasteur Institute of Iran, Tehran, Iran.
Pasteur Institute of Iran · IRQom University of Medical Science and Health Services · IR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe characterization of Leishmania species is important for clinical management of the diseases and the epidemiological control of the parasite distribution. Most of the published polymerase chain reaction (PCR) amplification methods lack the ability to identify all species complexes, have low performance and usually need post-PCR procedures. There is a need for improving the diagnosis of CL by development of an accurate affordable PCR method to identify all Leishmania species in clinical specimens.

methodsWe designed an optimized a PCR amplifying the internal transcribed spacer 2 sequence of the ribosomal RNA gene (ITS2) aligned from different strains of CL-causing Leishmania species in the Old World. The performance of the method was evaluated on lesion samples from several CL suspected patients and the limit of detection (LOD) was determined on DNA of promastigotes from reference strains.

resultsThe universal PCR enabled simultaneous discrimination of L. major, L. tropica and L. infantum using one primer pair in one reaction. Stained smear microscopy and Novy-MacNeal-Nicolle (NNN) medium culture alone detected 77.27% (17/22) and 72.73% (16/22) of the positive CL samples, respectively. The PCR assay showed 100% sensitivity (22/22) (95% CI: 84.56-100%) and 100% specificity (3/3) (95% CI: 29.24-100%) for species identification on isolates from lesion scraping/exudate and 100% sensitivity (13/13) (95% CI: 75.29-100%) and 100% specificity (11/11) (95% CI: 71.51-100%) for species identification on biopsy samples of CL patients, while being capable to successfully amplify as little as 0.01-0.1 pg of Leishmania DNA from cultured promastigotes.

conclusionsWe present a validated easy-to-use affordable universal PCR assay to identify the most common Old World Leishmania species causing CL. This PCR assay could be used as a sensitive/specific technique to diagnose CL-causing Leishmania species in clinical samples with high accuracy.

Indexed as

LeishmaniaAnimalsDNA, ProtozoanHumansLeishmaniasis, CutaneousPolymerase Chain ReactionDNA, ProtozoanCutaneous leishmaniasisDiagnosisITSLeishmaniaPCR

Identifiers

PMID32854753
PMCPMC7450935
OpenAlexW3081404074

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.