Evidence map›Paper›PMID 32854417›Full record

ArticlePlants (Basel, Switzerland)2020

The Phylogeny of Class B Flavoprotein Monooxygenases and the Origin of the YUCCA Protein Family.

Igor I Turnaev, Konstantin V Gunbin, Valentin V Suslov, Ilya R Akberdin, Nikolay A Kolchanov, Dmitry A Afonnikov

Open access · goldAbstract read
In one paragraph

Article in Plants (Basel, Switzerland), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.8field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 9 citations in OpenAlex.

  1. The auxin gatekeepers: Evolution and diversification of the YUCCA family.The Plant journal : for cell and molecular biology · 2025
    Article
  2. Article
  3. Article
  4. On the Evolutionary Origins of Land Plant Auxin Biology.Cold Spring Harbor perspectives in biology · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Igor I TurnaevInstitute of Cytology and Genetics, SB RAS, 630090 Novosibirsk, Russia.
Konstantin V GunbinInstitute of Cytology and Genetics, SB RAS, 630090 Novosibirsk, Russia.
Valentin V SuslovInstitute of Cytology and Genetics, SB RAS, 630090 Novosibirsk, Russia.
Ilya R AkberdinInstitute of Cytology and Genetics, SB RAS, 630090 Novosibirsk, Russia.ORCID 0000-0003-0010-8620
Nikolay A KolchanovInstitute of Cytology and Genetics, SB RAS, 630090 Novosibirsk, Russia.
Dmitry A AfonnikovInstitute of Cytology and Genetics, SB RAS, 630090 Novosibirsk, Russia.ORCID 0000-0001-9738-1409
Institute of Cytology and Genetics · RUNovosibirsk State University · RU

Funding

Russian State Budget Project 0324-2019-0040-C-01
6 · The paper itself

Abstract

YUCCA (YUCCA flavin-dependent monooxygenase) is one of the two enzymes of the main auxin biosynthesis pathway (tryptophan aminotransferase enzyme (TAA)/YUCCA) in land plants. The evolutionary origin of the YUCCA family is currently controversial: YUCCAs are assumed to have emerged via a horizontal gene transfer (HGT) from bacteria to the most recent common ancestor (MRCA) of land plants or to have inherited it from their ancestor, the charophyte algae. To refine YUCCA origin, we performed a phylogenetic analysis of the class B flavoprotein monooxygenases and comparative analysis of the sequences belonging to different families of this protein class. We distinguished a new protein family, named type IIb flavin-containing monooxygenases (FMOs), which comprises homologs of YUCCA from Rhodophyta, Chlorophyta, and Charophyta, land plant proteins, and FMO-E, -F, and -G of the bacterium

Indexed as

auxin biosynthesischarophytesflavin-dependent monooxygenasehorizontal gene transferphylogenyYUCCA

Identifiers

PMID32854417
PMCPMC7570161
OpenAlexW3081141718

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.