Evidence map›Paper›PMID 32853382›Full record

ArticleBlood advances2020

The hematopoietic stem cell marker VNN2 is associated with chemoresistance in pediatric B-cell precursor ALL.

Beat Bornhauser, Gunnar Cario, Anna Rinaldi, Thomas Risch, Virginia Rodriguez Martinez, Moritz Schütte, Hans-Jörg Warnatz, Nastassja Scheidegger, Paulina Mirkowska, Martina Temperli and 29 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Blood advances, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.1field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. GPI-80 Augments NF-κB Activation in Tumor Cells.International journal of molecular sciences · 2021
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

39 authors at 11 institutions in 5 countries.

Beat BornhauserDepartment of Oncology, University Children's Hospital Zurich and Children's Research Center, Zurich, Switzerland.
Gunnar CarioDepartment of Pediatrics, University Medical Center Schleswig-Holstein, Campus Kiel, Kiel, Germany.
Anna RinaldiDepartment of Oncology, University Children's Hospital Zurich and Children's Research Center, Zurich, Switzerland.
Thomas RischDepartment of Vertebrate Genomics, Max Planck Institute for Molecular Genetics, Berlin, Germany.
Virginia Rodriguez MartinezDepartment of Oncology, University Children's Hospital Zurich and Children's Research Center, Zurich, Switzerland.
Moritz SchütteAlacris Theranostics, Berlin, Germany.
Hans-Jörg WarnatzDepartment of Vertebrate Genomics, Max Planck Institute for Molecular Genetics, Berlin, Germany.
Nastassja ScheideggerDepartment of Oncology, University Children's Hospital Zurich and Children's Research Center, Zurich, Switzerland.
Paulina MirkowskaDepartment of Oncology, University Children's Hospital Zurich and Children's Research Center, Zurich, Switzerland.
Martina TemperliDepartment of Oncology, University Children's Hospital Zurich and Children's Research Center, Zurich, Switzerland.
Claudia MöllerDepartment of Oncology, University Children's Hospital Zurich and Children's Research Center, Zurich, Switzerland.
Angela SchumichSt. Anna Children's Hospital and Children's Cancer Research Institute, Vienna, Austria.
Michael DworzakSt. Anna Children's Hospital and Children's Cancer Research Institute, Vienna, Austria.
Andishe AttarbaschiSt. Anna Children's Hospital and Children's Cancer Research Institute, Vienna, Austria.
Monika BrüggemannDepartment of Hematology, University Hospital Schleswig-Holstein, Kiel, Germany.
Mathias RitgenDepartment of Hematology, University Hospital Schleswig-Holstein, Kiel, Germany.
Ester MejstrikovaDepartment of Pediatric Hematology and Oncology, Charles University Hospital Motol, Prague, Czech Republic.
Andreas HofmannDepartment of Health Sciences and Technology and Institute for Molecular Systems Biology, ETH Zurich, Zurich, Switzerland.
Barbara BuldiniDepartment of Women's and Children's Health, University of Padova, Padova, Italy.
Pamela ScarparoDepartment of Women's and Children's Health, University of Padova, Padova, Italy.
Giuseppe BassoDepartment of Women's and Children's Health, University of Padova, Padova, Italy.
Oscar MagliaM. Tettamanti Research Center, University of Milano Bicocca, Monza, Italy.
Giuseppe GaipaM. Tettamanti Research Center, University of Milano Bicocca, Monza, Italy.
Tessa Lara SkroblynPediatric Hematology and Oncology, Charité University Hospital, Berlin, Germany.
Quy NgoDepartment of Oncology, University Children's Hospital Zurich and Children's Research Center, Zurich, Switzerland.
Geertruij Te KronnieDepartment of Women's and Children's Health, University of Padova, Padova, Italy.
Elena VendraminiDepartment of Women's and Children's Health, University of Padova, Padova, Italy.
Renate Panzer-GrümayerSt. Anna Children's Hospital and Children's Cancer Research Institute, Vienna, Austria.
Malwine Jeanette BarzDepartment of Oncology, University Children's Hospital Zurich and Children's Research Center, Zurich, Switzerland.
Blerim MarovcaDepartment of Oncology, University Children's Hospital Zurich and Children's Research Center, Zurich, Switzerland.
Mathias Hauri-HohlDepartment of Stem Cell Transplantation, University Children's Hospital Zurich, Zurich, Switzerland; and.
Felix NiggliDepartment of Oncology, University Children's Hospital Zurich and Children's Research Center, Zurich, Switzerland.
Cornelia EckertPediatric Hematology and Oncology, Charité University Hospital, Berlin, Germany.
Martin SchrappeDepartment of Pediatrics, University Medical Center Schleswig-Holstein, Campus Kiel, Kiel, Germany.
Martin StanullaPediatric Hematology and Oncology, Hannover Medical School, Hannover, Germany.
Martin ZimmermannPediatric Hematology and Oncology, Hannover Medical School, Hannover, Germany.
Bernd WollscheidDepartment of Health Sciences and Technology and Institute for Molecular Systems Biology, ETH Zurich, Zurich, Switzerland.
Marie-Laure YaspoDepartment of Vertebrate Genomics, Max Planck Institute for Molecular Genetics, Berlin, Germany.
Jean-Pierre BourquinDepartment of Oncology, University Children's Hospital Zurich and Children's Research Center, Zurich, Switzerland.
University Children's Hospital Zurich · CHUniversity of Padua · ITSt Anna Children's Hospital · ATMax Planck Institute for Molecular Genetics · DECharité - Universitätsmedizin Berlin · DEETH Zurich · CHMedizinische Hochschule Hannover · DEUniversity Hospital Schleswig-Holstein · DEUniversity of Milano-Bicocca · ITAlacris (Germany) · DECharles University · CZ

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Most relapses of acute lymphoblastic leukemia (ALL) occur in patients with a medium risk (MR) for relapse on the Associazione Italiana di Ematologia e Oncologia Pediatrica and Berlin-Frankfurt-Münster (AIEOP-BFM) ALL protocol, based on persistence of minimal residual disease (MRD). New insights into biological features that are associated with MRD are needed. Here, we identify the glycosylphosphatidylinositol-anchored cell surface protein vanin-2 (VNN2; GPI-80) by charting the cell surface proteome of MRD very high-risk (HR) B-cell precursor (BCP) ALL using a chemoproteomics strategy. The correlation between VNN2 transcript and surface protein expression enabled a retrospective analysis (ALL-BFM 2000; N = 770 cases) using quantitative polymerase chain reaction to confirm the association of VNN2 with MRD and independent prediction of worse outcome. Using flow cytometry, we detected VNN2 expression in 2 waves, in human adult bone marrow stem and progenitor cells and in the mature myeloid compartment, in line with proposed roles for fetal hematopoietic stem cells and inflammation. Prospective validation by flow cytometry in the ongoing clinical trial (AIEOP-BFM 2009) identified 10% (103/1069) of VNN2+ BCP ALL patients at first diagnosis, primarily in the MRD MR (48/103, 47%) and HR (37/103, 36%) groups, across various cytogenetic subtypes. We also detected frequent mutations in epigenetic regulators in VNN2+ ALLs, including histone H3 methyltransferases MLL2, SETD2, and EZH2 and demethylase KDM6A. Inactivation of the VNN2 gene did not impair leukemia repopulation capacity in xenografts. Taken together, VNN2 marks a cellular state of increased resistance to chemotherapy that warrants further investigations. Therefore, this marker should be included in diagnostic flow cytometry panels.

Indexed as

Drug Resistance, NeoplasmPrecursor Cell Lymphoblastic Leukemia-LymphomaAmidohydrolasesAntineoplastic Combined Chemotherapy ProtocolsB-LymphocytesCell Adhesion MoleculesChildGPI-Linked ProteinsHematopoietic Stem CellsHumansProspective StudiesRetrospective StudiesAmidohydrolasesCell Adhesion MoleculesGPI-Linked ProteinsVNN2 protein, human

Identifiers

PMID32853382
PMCPMC7479947
OpenAlexW3080439654

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.